RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DNAJA2O60884 412 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 NUDT14O95848 222 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 DBIP07108 87 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 LINGO3P0C6S8 592 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 UBTFL6P0CB48 400 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 HNRNPCL4P0DMR1 293 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF708P17019 499 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 PGM1P36871 562 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 EIF1P41567 113 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 SMSP52788 366 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 CLDN18P56856 261 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 C1orf185Q5T7R7 199 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 PEX5LQ8IYB4 626 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 METTL25Q8N6Q8 603 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 OR5M1Q8NGP8 315 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 PSMG3-AS1Q96PY0 264 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 TTYH2Q9BSA4 534 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 THUMPD3Q9BV44 507 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 TMEM38AQ9H6F2 299 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ICE1Q9Y2F5 2266 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 ASH1LQ9NR48 2969 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 CLDN24A6NM45 220 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 C5orf58C9J3I9 102 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 MRASO14807 208 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 CYP7B1O75881 506 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 NID1P14543 1247 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 IL7RP16871 459 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 POU3F2P20265 443 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 CCR4P51679 360 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 SRYQ05066 204 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 PMPCAQ10713 525 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 CBFBQ13951 182 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 ADRM1Q16186 407 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 ACSF3Q4G176 576 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 NCCRP1Q6ZVX7 275 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 TMCO5AQ8N6Q1 288 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 RP9Q8TA86 221 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 ZPLD1Q8TCW7 415 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 ITLN2Q8WWU7 325 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 CCDC106Q9BWC9 280 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 AP4B1Q9Y6B7 739 aa17.94■□□□□ 0.46
PDLIM2-207ENST00000409417 SHISA8B8ZZ34 492 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 BCAS1O75363 584 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 UTP20O75691 2785 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 GLI4P10075 376 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 ARAFP10398 606 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 PEPDP12955 493 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 AGAP20933 346 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 PSMA4P25789 261 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 MTPNP58546 118 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 CAPRIN1Q14444 709 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 RPS26P11Q5JNZ5 115 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 REP15Q6BDI9 236 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 XKRXQ6PP77 449 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 PIGWQ7Z7B1 504 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 MRGPRGQ86SM5 289 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 PCYOX1LQ8NBM8 494 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 OR52P1PQ8NH57 321 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 BBS10Q8TAM1 723 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 WDR60Q8WVS4 1066 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 RND1Q92730 232 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 LRRC58Q96CX6 371 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 MYLK2Q9H1R3 596 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 KAT8Q9H7Z6 458 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 EXOSC3Q9NQT5 275 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 STOML1Q9UBI4 398 aa17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 GPC6Q9Y625 555 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-207ENST00000409417 H0Y3Z8 333 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 FXYD1O00168 92 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 PGM3O95394 542 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 EPPINO95925 133 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 ADH6P28332 368 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 CDK6Q00534 326 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 SELPLGQ14242 412 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 TOMM34Q15785 309 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 NANOGP8Q6NSW7 305 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 REEP3Q6NUK4 255 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF808Q8N4W9 903 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 RNF145Q96MT1 663 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 NPAS1Q99742 590 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 SH3GL1Q99961 368 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 SLC39A3Q9BRY0 314 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 TRIM8Q9BZR9 551 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 NANOGQ9H9S0 305 aa17.92■□□□□ 0.46
PDLIM2-207ENST00000409417 CD8B2A6NJW9 211 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 H3BML4 177 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 ETV2O00321 342 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 THBS1P07996 1170 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 COX4I1P13073 169 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 ETS2P15036 469 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 PRKCAP17252 672 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 SLC6A2P23975 617 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 NUP107P57740 925 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 PLAURQ03405 335 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 LARS2Q15031 903 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 ZSWIM7Q19AV6 140 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 LIN52Q52LA3 116 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 MRPL2Q5T653 305 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 NSUN5P2Q63ZY6 315 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 LACC1Q8IV20 430 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms