RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SLC45A3Q96JT2 553 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 CCT7Q99832 543 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ST6GALNAC5Q9BVH7 336 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 TBC1D10AQ9BXI6 508 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 BLZF1Q9H2G9 400 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 LIME1Q9H400 295 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 DHX33Q9H6R0 707 aaKnown RBP3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 LRRC40Q9H9A6 602 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 ABCC13Q9NSE7 274 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 RMND1Q9NWS8 449 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 THEGQ9P2T0 379 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 RNF14Q9UBS8 474 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 RWDD2AQ9UIY3 292 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 MYH3P11055 1940 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 MYO3BQ8WXR4 1341 aa3.93□□□□□ -1.78
HMGB3P18-201ENST00000406327 COL24A1Q17RW2 1714 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 PLIN4Q96Q06 1357 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 IGLV4-3A0A075B6K6 122 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TRBV7-9A0A0J9YWB2 115 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 MFSD2BA6NFX1 497 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TRIM64CA6NLI5 447 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 PP2D1A8MPX8 630 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 C11orf98E9PRG8 122 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 K7ERI5 159 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SDHDO14521 159 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 STX10O60499 249 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 BCAS1O75363 584 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 MTX2O75431 263 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SORBS2O94875 1100 aaKnown RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 CCDC159P0C7I6 412 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 BCKDHAP12694 445 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SELEP16581 610 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 HOXB6P17509 224 aaKnown RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SLC1A4P43007 532 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 STK19P49842 368 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 RAG2P55895 527 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 STX17P56962 302 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPAG1Q07617 926 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 IL24Q13007 206 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TFDP1Q14186 410 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 FILIP1LQ4L180 1135 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 HSP90AA4PQ58FG1 418 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZNF772Q68DY9 489 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TMUB2Q71RG4 321 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 GRAMD2AQ8IUY3 354 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TRMT10AQ8TBZ6 339 aaKnown RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TBCKQ8TEA7 893 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 NELFBQ8WX92 580 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 ANKRD7Q92527 254 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 GTF3AQ92664 365 aaKnown RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 MYLPFQ96A32 169 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 MTMR9Q96QG7 549 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 PANX2Q96RD6 677 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 IWS1Q96ST2 819 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 PSMB7Q99436 277 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZSCAN5AQ9BUG6 496 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TRIM9Q9C026 710 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 IL1RL2Q9HB29 575 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 ESM1Q9NQ30 184 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPATA2Q9UM82 520 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 EXOSC1Q9Y3B2 195 aaKnown RBP3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 FBXO7Q9Y3I1 522 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 CPQQ9Y646 472 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPACA6W5XKT8 324 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SNED1Q8TER0 1413 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 SYNRGQ9UMZ2 1314 aa3.92□□□□□ -1.78
HMGB3P18-201ENST00000406327 TNRC6CQ9HCJ0 1690 aaKnown RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 BTAF1O14981 1849 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 K7EQG2 157 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 IMPA2O14732 288 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZBTB5O15062 677 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 LINC01565O15544 149 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZSCAN12O43309 604 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 KLRC4O43908 158 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 SNAP91O60641 907 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 TPST2O60704 377 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 DUS4LO95620 317 aaKnown RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 OAS1P00973 400 aaKnown RBP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 CFC1P0CG37 223 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 ANXA3P12429 323 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 PPT1P50897 306 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 METAP1P53582 386 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 RIPK1Q13546 671 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 LINC01620Q4KN68 170 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 C2CD6Q53TS8 623 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 VWA2Q5GFL6 755 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 DCST2Q5T1A1 773 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 BTNL3Q6UXE8 466 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 SYT10Q6XYQ8 523 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 USP43Q70EL4 1123 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 DPY19L4Q7Z388 723 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 ANKRD37Q7Z713 158 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 TMEM17Q86X19 198 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 WDSUB1Q8N9V3 476 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR4F17Q8NGA8 305 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 C11orf45Q8TAV5 145 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 DNASE2BQ8WZ79 361 aa3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB3P18-201ENST00000406327 ART4Q93070 314 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms