RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CEACAM7Q14002 265 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 KRTCAP3Q53RY4 240 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 ARSKQ6UWY0 536 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 SMYD1Q8NB12 490 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 BHLHE22Q8NFJ8 381 aaPredicted RBP26.64■■□□□ 1.86
USP42-202ENST00000404008 ARSGQ96EG1 525 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 PINK1Q9BXM7 581 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 TAS2R10Q9NYW0 307 aa26.64■■□□□ 1.86
USP42-202ENST00000404008 PRPF19Q9UMS4 504 aaKnown RBP26.64■■□□□ 1.86
USP42-202ENST00000404008 GYG2O15488 501 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 TPST1O60507 370 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 CDC40O60508 579 aaKnown RBP eCLIP26.63■■□□□ 1.85
USP42-202ENST00000404008 ATP5HO75947 161 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 EDN3P14138 238 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 KDELR2P33947 212 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 CCR4P51679 360 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 CBFBQ13951 182 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 FXNQ16595 210 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 EIPR1Q53HC9 387 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 YRDCQ86U90 279 aaKnown RBP26.63■■□□□ 1.85
USP42-202ENST00000404008 COMTD1Q86VU5 262 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 OR14L1PQ8NHC6 308 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 GPR119Q8TDV5 335 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 FIG4Q92562 907 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 BTBD10Q9BSF8 475 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 EGFL7Q9UHF1 273 aa26.63■■□□□ 1.85
USP42-202ENST00000404008 A0A087WZY1 265 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 NUDT14O95848 222 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 EPPINO95925 133 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 GGT1P19440 569 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 TCN1P20061 433 aaPredicted RBP26.62■■□□□ 1.85
USP42-202ENST00000404008 GLIPR1L2Q4G1C9 344 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 DNAL1Q4LDG9 190 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 WIPI1Q5MNZ9 446 aaPredicted RBP26.62■■□□□ 1.85
USP42-202ENST00000404008 TRILQ7L0X0 811 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 SLC6A15Q9H2J7 730 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 MED17Q9NVC6 651 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 VDAC3Q9Y277 283 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 ZNF407Q9C0G0 2248 aa26.62■■□□□ 1.85
USP42-202ENST00000404008 EBAG9O00559 213 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 ADAM11O75078 769 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 HK1P19367 917 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 CD247P20963 164 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 KCNJ5P48544 419 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 ZNF41P51814 821 aaPredicted RBP26.61■■□□□ 1.85
USP42-202ENST00000404008 DUSP7Q16829 419 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 PLPPR5Q32ZL2 321 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 LRRC23Q53EV4 343 aaPredicted RBP26.61■■□□□ 1.85
USP42-202ENST00000404008 SPPL2CQ8IUH8 684 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 ZNF440Q8IYI8 595 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 SLC26A7Q8TE54 656 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 RASSF5Q8WWW0 418 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 LDAHQ9H6V9 325 aa26.61■■□□□ 1.85
USP42-202ENST00000404008 TRGV5A0A0B4J1U4 118 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 A0A1B0GVC2 190 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 SUSD5O60279 629 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 HCN1O60741 890 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 LINGO3P0C6S8 592 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 NCK1P16333 377 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 MSX2P35548 267 aaPredicted RBP26.6■■□□□ 1.85
USP42-202ENST00000404008 SLC6A8P48029 635 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 RASSF2P50749 326 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 HSF1Q00613 529 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 C19orf57Q0VDD7 668 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 GLYR1Q49A26 553 aaPredicted RBP26.6■■□□□ 1.85
USP42-202ENST00000404008 GHDCQ8N2G8 530 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 GPR32P1Q8NGA4 272 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 NEIL3Q8TAT5 605 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 SLC35B4Q969S0 331 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 MIB2Q96AX9 1013 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 ZNF524Q96C55 264 aa26.6■■□□□ 1.85
USP42-202ENST00000404008 RPH3AQ9Y2J0 694 aaPredicted RBP26.6■■□□□ 1.85
USP42-202ENST00000404008 SVILO95425 2214 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 CFAP73A6NFT4 308 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 FAM47E-STBD1D6RA91 191 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 IFNA14P01570 189 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 GKN3PP0CG01 181 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 PGCP20142 388 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 TCEA1P23193 301 aaKnown RBP26.59■■□□□ 1.85
USP42-202ENST00000404008 B3GALT5-AS1P59052 145 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 FOXK1P85037 733 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 TOMM34Q15785 309 aaPredicted RBP26.59■■□□□ 1.85
USP42-202ENST00000404008 ST6GALNAC3Q8NDV1 305 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 ZBTB8AQ96BR9 441 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 THTPAQ9BU02 230 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 ZNF462Q96JM2 2506 aa26.59■■□□□ 1.85
USP42-202ENST00000404008 C7orf72A4D263 438 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 SYT5O00445 386 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 AP3D1O14617 1153 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 FRS3O43559 492 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 C8BP07358 591 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 RYKP34925 604 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 EPS8Q12929 822 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 QPRTQ15274 297 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 TMEM44Q2T9K0 475 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 CYBRD1Q53TN4 286 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 GLYATQ6IB77 296 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 CCDC121Q6ZUS5 278 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 ZNF550Q7Z398 422 aa26.58■■□□□ 1.85
USP42-202ENST00000404008 CHERPQ8IWX8 916 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms