RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GPM6BQ13491 265 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 DCST2Q5T1A1 773 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 C2orf66Q6UXQ4 117 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 SYT10Q6XYQ8 523 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 VSTM4Q8IW00 320 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 KIR3DL3Q8N743 410 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 ATP6V0D2Q8N8Y2 350 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR1F12Q8NHA8 337 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 BADQ92934 168 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 PSKH2Q96QS6 385 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 SECISBP2Q96T21 854 aaKnown RBP2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 DPH7Q9BTV6 452 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 SPATA16Q9BXB7 569 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 DEFB126Q9BYW3 111 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 CHIAQ9BZP6 476 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 VCX2Q9H322 139 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 SPRR3Q9UBC9 169 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 MAB21L2Q9Y586 359 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 FRMPD4Q14CM0 1322 aa2.91□□□□□ -1.94
HMGB1P17-201ENST00000403495 COL5A2P05997 1499 aaPredicted RBP2.9□□□□□ -1.94
HMGB1P17-201ENST00000403495 ATAD2BQ9ULI0 1458 aa2.9□□□□□ -1.94
HMGB1P17-201ENST00000403495 ANKRD30BQ9BXX2 1392 aa2.9□□□□□ -1.94
HMGB1P17-201ENST00000403495 C15orf38-AP3S2A0A0A6YYH1 394 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 TRIM64CA6NLI5 447 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF705EA8MWA4 302 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 BTN3A3O00478 584 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR7A17O14581 309 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 MSH4O15457 936 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 SNNO75324 88 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 HMMRO75330 724 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 IL1BP01584 269 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 POLR2EP19388 210 aaKnown RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 MMP11P24347 488 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 EPHX2P34913 555 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 P2RY1P47900 373 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 RPL29P47914 159 aaKnown RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 TAF6P49848 677 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 HLCSP50747 726 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 ELAVL3Q14576 367 aaKnown RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC1A5Q15758 541 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF239Q16600 458 aaKnown RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 TATDN3Q17R31 274 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC25A30Q5SVS4 291 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 TPGS2Q68CL5 300 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 CENPPQ6IPU0 288 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZSCAN25Q6NSZ9 544 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 FAM71F2Q6NXP2 309 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 FAHD2BQ6P2I3 314 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 KDELC1Q6UW63 502 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 CXCL17Q6UXB2 119 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 PAMR1Q6UXH9 720 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 CCDC80Q76M96 950 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 P2RY8Q86VZ1 359 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 FBXO16Q8IX29 292 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 UBQLNLQ8IYU4 475 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF683Q8IZ20 524 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 CLDN19Q8N6F1 224 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 STEAP2Q8NFT2 490 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR4D5Q8NGN0 318 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR8J1Q8NGP2 316 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 FBXO30Q8TB52 745 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 TRMT10AQ8TBZ6 339 aaKnown RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 PAQR8Q8TEZ7 354 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 AENQ8WTP8 325 aaKnown RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC5A11Q8WWX8 675 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 PIGCQ92535 297 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 HAVCR1Q96D42 359 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC25A38Q96DW6 304 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 FAHD2AQ96GK7 314 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 TGM7Q96PF1 710 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 SIGLEC12Q96PQ1 595 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 NPAS2Q99743 824 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 OMDQ99983 421 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 PYGO2Q9BRQ0 406 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 PPDPFQ9H3Y8 114 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 WRAP73Q9P2S5 460 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 PCSK1NQ9UHG2 260 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 ABCA7Q8IZY2 2146 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 KIF16BQ96L93 1317 aa2.9□□□□□ -1.95
HMGB1P17-201ENST00000403495 CFAP65Q6ZU64 1925 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 PP2D1A8MPX8 630 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 K7ENP7 123 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF208O43345 1280 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 H2AFZP0C0S5 128 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR8U8P0C7N1 319 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 CYP2B6P20813 491 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 HMGB2P26583 209 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 TAGLN2P37802 199 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 AP3M2P53677 418 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 AIF1P55008 147 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 RPL32P62910 135 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 MRPS11P82912 194 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 MAP2K1Q02750 393 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 BCL2L1Q07817 233 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 C1orf61Q13536 156 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC25A52Q3SY17 297 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 ATL3Q6DD88 541 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 UQCC3Q6UW78 93 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 VITQ6UXI7 678 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 C16orf62Q7Z3J2 963 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms