RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ATG16L1Q676U5 607 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TNFAIP8L2Q6P589 184 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 VWA1Q6PCB0 445 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZCCHC12Q6PEW1 402 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 CBLN3Q6UW01 205 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SHISA2Q6UWI4 295 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 CHMP1BQ7LBR1 199 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 P4HA3Q7Z4N8 544 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 LUZP2Q86TE4 346 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TMEM200AQ86VY9 491 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 NATD1Q8N6N6 113 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 CNEP1R1Q8N9A8 125 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR8J2Q8NGG1 315 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 B4GALNT2Q8NHY0 566 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 RFWD2Q8NHY2 731 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 LINC01560Q8TB33 94 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 FNDC9Q8TBE3 224 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 POC1BQ8TC44 478 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 PHOSPHO1Q8TCT1 267 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF75CPQ92670 426 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 RAB8BQ92930 207 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 RNASE6Q93091 150 aaKnown RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TESCQ96BS2 214 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 MOAP1Q96BY2 351 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF524Q96C55 264 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 DTNBP1Q96EV8 351 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 C14orf79Q96F83 325 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 RNF145Q96MT1 663 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR52B2Q96RD2 323 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 SDF2Q99470 211 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 TM9SF2Q99805 663 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 PIGQQ9BRB3 760 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 INPP5KQ9BT40 448 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR51I1Q9H343 314 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 MCCC2Q9HCC0 563 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 MED17Q9NVC6 651 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 AIG1Q9NVV5 245 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 THAP1Q9NVV9 213 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 FRRS1LQ9P0K9 344 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF629Q9UEG4 869 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 KCNE5Q9UJ90 142 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 CARD8Q9Y2G2 431 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 GPR45Q9Y5Y3 372 aa5.19□□□□□ -1.58
HMGB1P20-201ENST00000402555 FLNAP21333 2647 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRRC2AP48634 2157 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 A0A0J9YW62 118 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRSS51A0A1B0GVH4 220 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 A0A1W2PQD3 144 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRAMEF27A3QJZ7 478 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 TRPC5OSA6NMA1 111 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 E9PBE3 544 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 NPIPB9F8W1W9 429 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GTPBP1O00178 669 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 RNASET2O00584 256 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF195O14628 629 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 TNFSF11O14788 317 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 EFNA2O43921 213 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CXCL13O43927 109 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 FCMRO60667 390 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 DIAPH2O60879 1101 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CYP7B1O75881 506 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 TNFSF13O75888 250 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 RGS9O75916 674 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SMNDC1O75940 238 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 AQP8O94778 261 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 RCBTB2O95199 551 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 NUDT14O95848 222 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 IL18BPO95998 194 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GSNP06396 782 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 KRT16P08779 473 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 UQCRC2P22695 453 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PSMA4P25789 261 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 LCN1P31025 176 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SFTPDP35247 375 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CHI3L1P36222 383 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CPOXP36551 454 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CDKN2CP42773 168 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 EIF1AXP47813 144 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC6A8P48029 635 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CPA2P48052 419 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CCR4P51679 360 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF41P51814 821 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLNS1AP54105 237 aaKnown RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC18A1P54219 525 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 ATP12AP54707 1039 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 FUT5Q11128 374 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 FOXF1Q12946 379 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PON3Q15166 354 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GPR68Q15743 365 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 MAPK14Q16539 360 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 BCL2A1Q16548 175 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SGCBQ16585 318 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 FBXL19-AS1Q494R0 122 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 GLYR1Q49A26 553 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 KLHL26Q53HC5 615 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 PDZK1Q5T2W1 519 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 ANXA8L1Q5VT79 327 aa5.18□□□□□ -1.58
HMGB1P20-201ENST00000402555 SAXO2Q658L1 398 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms