RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ING2Q9H160 280 aa15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 EXOSC3Q9NQT5 275 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-205ENST00000397406 TP53I11O14683 189 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF264O43296 627 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 NDUFB5O43674 189 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 SCO2O43819 266 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 ANGPTL1O95841 491 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 ENDOUP21128 410 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 FUT4P22083 530 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 HTR2AP28223 471 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 RRM2P31350 389 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 GCKP35557 465 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 ACAA2P42765 397 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 IST1P53990 364 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 TRIP10Q15642 601 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 OGFRL1Q5TC84 451 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 LPCAT4Q643R3 524 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 BICRALQ6AI39 1079 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 RANBP3LQ86VV4 465 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 CYP4Z1Q86W10 505 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 EPHX4Q8IUS5 362 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF440Q8IYI8 595 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 NTNG2Q96CW9 530 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 PRRC1Q96M27 445 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 SECISBP2Q96T21 854 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 LAT2Q9GZY6 243 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 HPF1Q9NWY4 346 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 TESQ9UGI8 421 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 TEKT2Q9UIF3 430 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 CARD8Q9Y2G2 431 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 NTNG1Q9Y2I2 539 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 FAM32AQ9Y421 112 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 TESMINQ9Y4I5 508 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 RELNP78509 3460 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 SPTA1P02549 2419 aa15.47■□□□□ 0.07
TSPAN4-205ENST00000397406 ASH1LQ9NR48 2969 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 C17orf51A8MQB3 221 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 GTPBP1O00178 669 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 GNGT2O14610 69 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 AP3D1O14617 1153 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ADAMDEC1O15204 470 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 FMO6PO60774 539 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 WISP1O95388 367 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 PEX2P28328 305 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 CASP3P42574 277 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 PTDSS1P48651 473 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 CLK3P49761 638 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 HLCSP50747 726 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 SPIBQ01892 262 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF117Q03924 483 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 EPS8Q12929 822 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 PPP1R8Q12972 351 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 PIN1Q13526 163 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 GANABQ14697 944 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ENTPD8Q5MY95 495 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ABHD17BQ5VST6 288 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 CBLN3Q6UW01 205 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF550Q7Z398 422 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 TMEM179BQ7Z7N9 219 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ZNF227Q86WZ6 799 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 MISPQ8IVT2 679 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 GPALPP1Q8IXQ4 340 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ICA1LQ8NDH6 482 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 PAQR8Q8TEZ7 354 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ARSGQ96EG1 525 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 METTL7AQ9H8H3 244 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 GALNT9Q9HCQ5 603 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 ACER3Q9NUN7 267 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 STMN3Q9NZ72 180 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 RHCGQ9UBD6 479 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 CNOT11Q9UKZ1 510 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 LYVE1Q9Y5Y7 322 aa15.46■□□□□ 0.07
TSPAN4-205ENST00000397406 SAC3D1A6NKF1 404 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 CPSF4LA6NMK7 179 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 EIF4E2O60573 245 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 CYP7B1O75881 506 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 LIMS1P48059 325 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 HMGA2P52926 109 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 CDH12P55289 794 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 SNTA1Q13424 505 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 OFCC1Q8IZS5 231 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 PIK3C3Q8NEB9 887 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 OR4C15Q8NGM1 316 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 C9orf43Q8TAL5 461 aaPredicted RBP15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 ADAMTS16Q8TE57 1224 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 NR4A3Q92570 626 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 SGCZQ96LD1 299 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 EPYCQ99645 322 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 CIB1Q99828 191 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 KLHDC3Q9BQ90 382 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 ZNF559Q9BR84 538 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 POLR2J2Q9GZM3 115 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 POLR2J3Q9H1A7 115 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 REEP1Q9H902 201 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 CTPS2Q9NRF8 586 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 KLRF1Q9NZS2 232 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 OAZ3Q9UMX2 235 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 TP53TG5Q9Y2B4 290 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 U3KQV3 271 aa15.45■□□□□ 0.06
TSPAN4-205ENST00000397406 A6NL46 340 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms