RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TEX19Q8NA77 164 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 OR2M3Q8NG83 312 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 HSH2DQ96JZ2 352 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 GNRHR2Q96P88 292 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 EXOSC3Q9NQT5 275 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 FBXL2Q9UKC9 423 aa21.5■■□□□ 1.03
TSPAN4-203ENST00000397397 B4DXG7 233 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ANKRD65E5RJM6 399 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 PRKD3O94806 890 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 RASAL1O95294 804 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 GKN3PP0CG01 181 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 PMP22Q01453 160 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 RPUSD3Q6P087 351 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ENPP6Q6UWR7 440 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 FKBP9P1Q75LS8 142 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ZNF550Q7Z398 422 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ZFP62Q8NB50 900 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 TOR1AIP2Q8NFQ8 470 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ARSGQ96EG1 525 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ARHGDIGQ99819 225 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 TTTY12Q9BZ98 90 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ICAM5Q9UMF0 924 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 SH3GLB1Q9Y371 365 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 ATMQ13315 3056 aa21.49■■□□□ 1.03
TSPAN4-203ENST00000397397 TCRBV5S2A0A599 114 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 CFAP73A6NFT4 308 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 M0R3H8 397 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 NUDT14O95848 222 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 TNFRSF1BP20333 461 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 RYKP34925 604 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 RGS8P57771 180 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 NRF1Q16656 503 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 IFI44LQ53G44 452 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 SPATA24Q86W54 205 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 FAM86B1Q8N7N1 296 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 LSM14AQ8ND56 463 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 OR5W2Q8NH69 310 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 VANGL1Q8TAA9 524 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 PYURFQ96I23 114 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 PTGES2Q9H7Z7 377 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 EVA1AQ9H8M9 152 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 B4GALT7Q9UBV7 327 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 SLC9A8Q9Y2E8 581 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 C15orf41Q9Y2V0 281 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 PCNX3Q9H6A9 2034 aa21.48■■□□□ 1.03
TSPAN4-203ENST00000397397 ANKUB1A6NFN9 424 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 AQP12BA6NM10 295 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 FAM166BA8MTA8 275 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 CBR3O75828 277 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 C1QL1O75973 258 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 RFPL3SP0C7P2 107 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 SUMO3P55854 103 aaPredicted RBP21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 KLRB1Q12918 225 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 CBFBQ13951 182 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 CARM1Q86X55 608 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 AQP12AQ8IXF9 295 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 SLC35B4Q969S0 331 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 KLHDC3Q9BQ90 382 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 WFDC6Q9BQY6 131 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 HEATR5AQ86XA9 2040 aa21.47■■□□□ 1.03
TSPAN4-203ENST00000397397 ACOT7O00154 380 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 CDC40O60508 579 aaKnown RBP eCLIP21.46■■□□□ 1.032e-6■■■■■ 31.7
TSPAN4-203ENST00000397397 GLSO94925 669 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 LINGO3P0C6S8 592 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 PRG2P13727 222 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 GDF1P27539 372 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 OR1E2P47887 323 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 SLC6A8P48029 635 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 ERFP50548 548 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 PPIAP62937 165 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 HOXC5Q00444 222 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 EPS8Q12929 822 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 TOMM20Q15388 145 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 INAQ16352 499 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 COLEC12Q5KU26 742 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 LACC1Q8IV20 430 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 OR4D11Q8NGI4 311 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 GEMIN6Q8WXD5 167 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 DKKL1Q9UK85 242 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 AP3D1O14617 1153 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 ADAM11O75078 769 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 PGCP20142 388 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 ACAA2P42765 397 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 HYAL4Q2M3T9 481 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 SLC22A16Q86VW1 577 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 RBM45Q8IUH3 476 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 TMEM251Q8N6I4 163 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 Q8NA96 180 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 OR6T1Q8NGN1 323 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 GPR119Q8TDV5 335 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 POP5Q969H6 163 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 C1GALT1C1Q96EU7 318 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 DTNBP1Q96EV8 351 aa21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 ZNF703Q9H7S9 590 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-203ENST00000397397 NCKAP5O14513 1909 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 EIF4E1BA6NMX2 242 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 FAM47E-STBD1D6RA91 191 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 UQCRBP14927 111 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 DPP4P27487 766 aa21.45■■□□□ 1.02
TSPAN4-203ENST00000397397 ZNF41P51814 821 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms