RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ENPP5Q9UJA9 477 aa13.74□□□□□ -0.21
CAPN3-207ENST00000397200 HEMK1Q9Y5R4 338 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-207ENST00000397200 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-207ENST00000397200 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 NME6O75414 186 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-207ENST00000397200 UGT2B17O75795 530 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ALPPP05187 535 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ICAM2P13598 275 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 OSMP13725 252 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
CAPN3-207ENST00000397200 CHRNEQ04844 493 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 PTGES3Q15185 160 aaKnown RBP13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ZNHIT3Q15649 155 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-207ENST00000397200 FGD3Q5JSP0 725 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ATAD3BQ5T9A4 648 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ZCCHC12Q6PEW1 402 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 HSDL2Q6YN16 418 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 SLC29A4Q7RTT9 530 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 P3H2Q8IVL5 708 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 OR6T1Q8NGN1 323 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 M1APQ8TC57 530 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 SLC7A13Q8TCU3 470 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 SLC35A4Q96G79 324 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 UCK2Q9BZX2 261 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 FOLH1BQ9HBA9 442 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 ACOT13Q9NPJ3 140 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 CHST2Q9Y4C5 530 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 PCSK5Q92824 1860 aa13.73□□□□□ -0.21
CAPN3-207ENST00000397200 TRBV11-1A0A0K0K1C0 115 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 NKX2-8O15522 239 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 RRP8O43159 456 aaKnown RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 MPZL2O60487 215 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 GABARAPO95166 117 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 PRKAR1AP10644 381 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 WT1P19544 449 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 CCNA2P20248 432 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 UGT2B15P54855 530 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 NFATC3Q12968 1075 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 TBCEQ15813 527 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ARHGAP11BQ3KRB8 267 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 CRTC2Q53ET0 693 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ATP1A1-AS1Q5TC04 95 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 UBE2UQ5VVX9 321 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 SLX4IPQ5VYV7 408 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 FRRS1Q6ZNA5 592 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 CDRT4Q8N9R6 151 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ADAMTS15Q8TE58 950 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 THAP4Q8WY91 577 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 SLC9A6Q92581 669 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 YIPF6Q96EC8 236 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 VSTM2LQ96N03 204 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 FUNDC2Q9BWH2 189 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 MMP25Q9NPA2 562 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 C2orf92A0A1B0GVN3 265 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 A0A1W2PPW3 197 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 SH3D21A4FU49 640 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 TP53P04637 393 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ACP2P11117 423 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 RPS4Y1P22090 263 aaKnown RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 EIF2S3P41091 472 aaKnown RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 MAP3K8P41279 467 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 CDC42P60953 191 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 PIN1Q13526 163 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 EBPQ15125 230 aaKnown RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 TMEM201Q5SNT2 666 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 HLA-DQA1Q5Y7H0 255 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 C12orf73Q69YU5 71 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 AHSA2Q719I0 299 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 C16orf62Q7Z3J2 963 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 WDR53Q7Z5U6 358 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 C9orf40Q8IXQ3 194 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 AMER2Q8N7J2 671 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ZSCAN1Q8NBB4 408 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 OR8K3Q8NH51 312 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ELP5Q8TE02 316 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 FCGR1BQ92637 280 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 RORBQ92753 470 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 FER1L6-AS2Q96M78 137 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 GAL3ST4Q96RP7 486 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ITPAQ9BY32 194 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ANKRD19PQ9H560 264 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 ZNF223Q9UK11 482 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-207ENST00000397200 DTX4Q9Y2E6 619 aa13.72□□□□□ -0.21
CAPN3-207ENST00000397200 FREM2Q5SZK8 3169 aa13.71□□□□□ -0.21
CAPN3-207ENST00000397200 TTC36A6NLP5 189 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 CLCA1A8K7I4 914 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 OR10H3O60404 316 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 ZFAND5O76080 213 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 CDK1P06493 297 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 THBS1P07996 1170 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 CELA2AP08217 269 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 ALOX5P09917 674 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 POU2F1P14859 743 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 MAP2K4P45985 399 aa13.71□□□□□ -0.22
CAPN3-207ENST00000397200 IDH2P48735 452 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms