RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SNTB1Q13884 538 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 GNA13Q14344 377 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 PON3Q15166 354 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 SLC25A53Q5H9E4 307 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 GGNQ86UU5 652 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 ANKRD46Q86W74 232 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 ZZZ3Q8IYH5 903 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 LILRA2Q8N149 483 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 DYDC1Q8WWB3 177 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 XAGE5Q8WWM1 108 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 TMEM234Q8WY98 164 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 SMPDL3BQ92485 455 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 REXO5Q96IC2 774 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 GMPPAQ96IJ6 420 aaPredicted RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 RNF145Q96MT1 663 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 DACH2Q96NX9 599 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 TRNT1Q96Q11 434 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 SAP130Q9H0E3 1048 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 WDR55Q9H6Y2 383 aaPredicted RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 SDR39U1Q9NRG7 319 aaPredicted RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 TMEM45AQ9NWC5 275 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
SEC13-204ENST00000397099 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 CARD8Q9Y2G2 431 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 WDR45Q9Y484 360 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 KCNE3Q9Y6H6 103 aa12.54□□□□□ -0.4
SEC13-204ENST00000397099 SPG11Q96JI7 2443 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 UQCRHLA0A096LP55 91 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 GOLGA8QA0A0J9YX86 632 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 GOLGA8OA6NCC3 632 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 A6NNC1 897 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 GOLGA8NF8WBI6 632 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 ETV2O00321 342 aaPredicted RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 RFXANKO14593 260 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 GMFGO60234 142 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 DNAJA2O60884 412 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 PLGP00747 810 aaPredicted RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 ZCCHC18P0CG32 403 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 PGCP20142 388 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 MRPL19P49406 292 aaKnown RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 RPS26P62854 115 aaKnown RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 GPR68Q15743 365 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 PDZK1Q5T2W1 519 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 FAM214BQ7L5A3 538 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 CMIPQ8IY22 773 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 MIER2Q8N344 545 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 ZNF614Q8N883 585 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 CNEP1R1Q8N9A8 125 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 OR5M1Q8NGP8 315 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 OR2V1Q8NHB1 315 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 FNDC9Q8TBE3 224 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 GPR119Q8TDV5 335 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 CPNE4Q96A23 557 aaPredicted RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 ZBTB9Q96C00 473 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 ZNF845Q96IR2 970 aaPredicted RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 KLHL15Q96M94 604 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
SEC13-204ENST00000397099 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 CRIM1Q9NZV1 1036 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 USH1CQ9Y6N9 552 aa12.53□□□□□ -0.4
SEC13-204ENST00000397099 MPDZO75970 2070 aa12.52□□□□□ -0.4
SEC13-204ENST00000397099 FAM221AA4D161 298 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 DIAPH2O60879 1101 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 CTAG2O75638 210 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 UGT2B17O75795 530 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 CSTAP01040 98 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 OR12D1P0DN82 309 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 IL11P20809 199 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 SLC6A8P48029 635 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 CTBP2P56545 445 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 CARD18P57730 90 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 STX1BP61266 288 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 SELENBP1Q13228 472 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 RNPS1Q15287 305 aaKnown RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 SLC9B1Q4ZJI4 515 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEC13-204ENST00000397099 HBMQ6B0K9 141 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 TNFAIP8L2Q6P589 184 aaPredicted RBP12.52□□□□□ -0.41
SEC13-204ENST00000397099 CBLN3Q6UW01 205 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 EPGNQ6UW88 154 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 LUZP2Q86TE4 346 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 ZNF619Q8N2I2 560 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 TMCO5AQ8N6Q1 288 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 OR6K3Q8NGY3 331 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 FIG4Q92562 907 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 NINJ1Q92982 152 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 STARD4Q96DR4 205 aa12.52□□□□□ -0.41
SEC13-204ENST00000397099 ITCHQ96J02 903 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms