RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ACAA2P42765 397 aaKnown RBP13.8□□□□□ -0.2
CBX3-202ENST00000396386 WNT4P56705 351 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 CFHR1Q03591 330 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 TMED1Q13445 227 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 SOWAHCQ53LP3 525 aaPredicted RBP13.8□□□□□ -0.2
CBX3-202ENST00000396386 NXNL2Q5VZ03 156 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 MED25Q71SY5 747 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 KMT5CQ86Y97 462 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 GPR135Q8IZ08 494 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 OR1L3Q8NH93 324 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 ARSGQ96EG1 525 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 DACH2Q96NX9 599 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 MMP27Q9H306 513 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 RNF167Q9H6Y7 350 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 SEMA5BQ9P283 1151 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 IL20RAQ9UHF4 553 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 hCG_2014768A0A024R1R8 64 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 TMEM129A0AVI4 362 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 DYRK3O43781 588 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 APOL3O95236 402 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 GIMD1P0DJR0 217 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
CBX3-202ENST00000396386 SPTBP11277 2137 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 BMP4P12644 408 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 ZNF12P17014 697 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 BMP7P18075 431 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 FBLP22087 321 aaKnown RBP13.79□□□□□ -0.2
CBX3-202ENST00000396386 ALAS2P22557 587 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 OR1D4P47884 311 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 ARRB1P49407 418 aaPredicted RBP13.79□□□□□ -0.2
CBX3-202ENST00000396386 RPS3AP61247 264 aaKnown RBP13.79□□□□□ -0.2
CBX3-202ENST00000396386 GDPGP1Q6ZNW5 385 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 QSOX2Q6ZRP7 698 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 GID4Q8IVV7 300 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 LSMEM1Q8N8F7 131 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 OR13C2Q8NGS9 318 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 SLC41A2Q96JW4 573 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
CBX3-202ENST00000396386 NDC1Q9BTX1 674 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 FN3KQ9H479 309 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 PNO1Q9NRX1 252 aaKnown RBP13.79□□□□□ -0.2
CBX3-202ENST00000396386 RPS6KB2Q9UBS0 482 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 STUB1Q9UNE7 303 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 CFL2Q9Y281 166 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
CBX3-202ENST00000396386 HCN1O60741 890 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 GPX5O75715 221 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 CSTAP01040 98 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 FUT1P19526 365 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 TBXA2RP21731 343 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 HTR1FP30939 366 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 FXYD6P3P58550 94 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 DSG2Q14126 1118 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 INAQ16352 499 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 ALG10BQ5I7T1 473 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 LYSMD4Q5XG99 296 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 CXXC5Q7LFL8 322 aaKnown RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 ZNF426Q9BUY5 554 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 EXOSC4Q9NPD3 245 aaKnown RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 HINT3Q9NQE9 182 aaKnown RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 DHCR7Q9UBM7 475 aaKnown RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 EFCAB7A8K855 629 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 BHLHE40O14503 412 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 DSCR3O14972 297 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 ADAM11O75078 769 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 SLC2A10O95528 541 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 MSL3P1P0C860 447 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 PSMA1P25786 263 aaKnown RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 SOX6P35712 828 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 SHBQ15464 509 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 ULK3Q6PHR2 472 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 WDR74Q6RFH5 385 aaPredicted RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 SMARCD3Q6STE5 483 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 SHFQ7M4L6 423 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 CADM2Q8N3J6 435 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 LNX2Q8N448 690 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 C7orf57Q8NEG2 295 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 PTPMT1Q8WUK0 201 aaPredicted RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 OIT3Q8WWZ8 545 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 TSLPQ969D9 159 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 CCDC74AQ96AQ1 378 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 SENP5Q96HI0 755 aaPredicted RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 ISYNA1Q9NPH2 558 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 MEPEQ9NQ76 525 aaPredicted RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 H2AFY2Q9P0M6 372 aaPredicted RBP13.78□□□□□ -0.2
CBX3-202ENST00000396386 SIGLEC7Q9Y286 467 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 SLC35A3Q9Y2D2 325 aa13.78□□□□□ -0.2
CBX3-202ENST00000396386 FAM86C2PA6NEL3 165 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 A8MU76 341 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 POLR1CO15160 346 aaPredicted RBP13.77□□□□□ -0.21
CBX3-202ENST00000396386 MYF5P13349 255 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 FOLR1P15328 257 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 CPEP16870 476 aa13.77□□□□□ -0.21
CBX3-202ENST00000396386 SLC37A1P57057 533 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms