RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 MCUR1Q96AQ8 359 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 CENPKQ9BS16 269 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 SAP130Q9H0E3 1048 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 PLAC1Q9HBJ0 212 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 SDHAF3Q9NRP4 125 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 MED11Q9P086 117 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 TSC22D4Q9Y3Q8 395 aa12.1□□□□□ -0.47
PFDN6-204ENST00000395131 CXCL13O43927 109 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 STK16O75716 305 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 PIAS1O75925 651 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
PFDN6-204ENST00000395131 ATP1B1P05026 303 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 SERPINE1P05121 402 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 PABPC4LP0CB38 370 aaKnown RBP12.09□□□□□ -0.47
PFDN6-204ENST00000395131 CT45A8P0DMV1 189 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 CT45A9P0DMV2 189 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 T-ENOLP0DO92 83 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 EPB42P16452 691 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 SPOCK1Q08629 439 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 EXOSC7Q15024 291 aaKnown RBP12.09□□□□□ -0.47
PFDN6-204ENST00000395131 STK11Q15831 433 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 DNAL1Q4LDG9 190 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 CT45A2Q5DJT8 189 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 CDKL4Q5MAI5 379 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 RNF128Q8TEB7 428 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 SLC7A6OSQ96CW6 309 aaPredicted RBP12.09□□□□□ -0.47
PFDN6-204ENST00000395131 TRMOQ9BU70 441 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 DCLRE1BQ9H816 532 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 YY1AP1Q9H869 796 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 KLHL13Q9P2N7 655 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 USP22Q9UPT9 525 aa12.09□□□□□ -0.47
PFDN6-204ENST00000395131 OR5H1A6NKK0 313 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 B4DSR2 109 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 FADS1O60427 444 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 PLIN3O60664 434 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 ANP32DO95626 131 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 STAMBPO95630 424 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 PCNAP12004 261 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 ZNF17P17021 662 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 EVI2BP34910 448 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 PIK3CBP42338 1070 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 MRPS22P82650 360 aaKnown RBP12.08□□□□□ -0.48
PFDN6-204ENST00000395131 RNPS1Q15287 305 aaKnown RBP12.08□□□□□ -0.48
PFDN6-204ENST00000395131 TSNQ15631 228 aaKnown RBP12.08□□□□□ -0.48
PFDN6-204ENST00000395131 CYP20A1Q6UW02 462 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 ESPNLQ6ZVH7 1005 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 FRA10AC1Q70Z53 315 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 LARP4Q71RC2 724 aaKnown RBP eCLIP12.08□□□□□ -0.488e-7■■■□□ 15.2
PFDN6-204ENST00000395131 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 SVOPLQ8N434 492 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 OR52R1Q8NGF1 315 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 OR2V1Q8NHB1 315 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 HUS1BQ8NHY5 278 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 RBBP8Q99708 897 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 SLITRK2Q9H156 845 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 TRIM33Q9UPN9 1127 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.08□□□□□ -0.48
PFDN6-204ENST00000395131 PTGDR2Q9Y5Y4 395 aa12.08□□□□□ -0.48
PFDN6-204ENST00000395131 POM121CA8CG34 1229 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 GSC2O15499 205 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 CIB2O75838 187 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 LYZL6O75951 148 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 GGT1P19440 569 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 COX5AP20674 150 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 PTX3P26022 381 aaPredicted RBP12.07□□□□□ -0.48
PFDN6-204ENST00000395131 KRT20P35900 424 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 MAGEA12P43365 314 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 SLC1A6P48664 564 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 HSPA7P48741 367 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 RAC1P63000 192 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 CARTPTQ16568 116 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 TRMT12Q53H54 448 aaKnown RBP12.07□□□□□ -0.48
PFDN6-204ENST00000395131 KLHL17Q6TDP4 642 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 GLCCI1Q86VQ1 547 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 RNF175Q8N4F7 328 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 ABHD3Q8WU67 409 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 ESAMQ96AP7 390 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 PKP2Q99959 881 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 RTN4RQ9BZR6 473 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 BRINP2Q9C0B6 783 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 RNPEPL1Q9HAU8 725 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 MYNNQ9NPC7 610 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 TAGLN3Q9UI15 199 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 MCM8Q9UJA3 840 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 ABCG2Q9UNQ0 655 aa12.07□□□□□ -0.48
PFDN6-204ENST00000395131 IGLV3-32A0A0A0MS00 114 aa12.06□□□□□ -0.48
PFDN6-204ENST00000395131 NPIPA5A0A0B4J1W7 369 aa12.06□□□□□ -0.48
PFDN6-204ENST00000395131 A0A0J9YW62 118 aa12.06□□□□□ -0.48
PFDN6-204ENST00000395131 HMX2A2RU54 273 aa12.06□□□□□ -0.48
PFDN6-204ENST00000395131 NCF1BA6NI72 391 aaPredicted RBP12.06□□□□□ -0.48
PFDN6-204ENST00000395131 NCF1CA8MVU1 366 aaPredicted RBP12.06□□□□□ -0.48
PFDN6-204ENST00000395131 NPIPA7E9PJI5 369 aa12.06□□□□□ -0.48
PFDN6-204ENST00000395131 SCO2O43819 266 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms