RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF835Q9Y2P0 537 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 AP4B1Q9Y6B7 739 aa12.06□□□□□ -0.48
USP44-202ENST00000393091 CSTAP01040 98 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 RAPSNQ13702 412 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 DUSP7Q16829 419 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 Q6ZPB1 254 aaPredicted RBP12.05□□□□□ -0.48
USP44-202ENST00000393091 GALNTL5Q7Z4T8 443 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 DHFR2Q86XF0 187 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 HES7Q9BYE0 225 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 OR14I1A6ND48 311 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 GPIP06744 558 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 PGCP20142 388 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 NADK2Q4G0N4 442 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 TSEN54Q7Z6J9 526 aaKnown RBP12.05□□□□□ -0.48
USP44-202ENST00000393091 LZICQ8WZA0 190 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 RAB3IPQ96QF0 476 aaPredicted RBP12.05□□□□□ -0.48
USP44-202ENST00000393091 FUZQ9BT04 418 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 PTGES2Q9H7Z7 377 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 GALNT9Q9HCQ5 603 aa12.05□□□□□ -0.48
USP44-202ENST00000393091 ZNF208O43345 1280 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 SUV39H1O43463 412 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 OIP5O43482 229 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 TPST1O60507 370 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 BCAS1O75363 584 aaPredicted RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 PRSS23O95084 383 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ACTL6AO96019 429 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ATP6V1B2P21281 511 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 BICRALQ6AI39 1079 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 TMEM251Q8N6I4 163 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 CNOT9Q92600 299 aaKnown RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 GPR137Q96N19 417 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 PSD2Q9BQI7 771 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 TRIM2Q9C040 744 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 PCNX3Q9H6A9 2034 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ANKRD11Q6UB99 2663 aaPredicted RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 ACOT7O00154 380 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 GSTA4O15217 222 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 RRP9O43818 475 aaKnown RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 HPGDP15428 266 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 PRKCAP17252 672 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 MST1P26927 711 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 C5orf46Q6UWT4 87 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 CHERPQ8IWX8 916 aaKnown RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 POC1BQ8TC44 478 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 DUSP19Q8WTR2 217 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 QRSL1Q9H0R6 528 aaKnown RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 MED17Q9NVC6 651 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 NPIPA5A0A0B4J1W7 369 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 NPIPA7E9PJI5 369 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ADAM11O75078 769 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 SERPINA1P01009 418 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 NPIPA8P0DM63 369 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 UQCRBP14927 111 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 CPN1P15169 458 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 APOBEC1P41238 236 aaKnown RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 DNASE1L1P49184 302 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 MERTKQ12866 999 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ZNF239Q16600 458 aaKnown RBP12.04□□□□□ -0.48
USP44-202ENST00000393091 IFI44LQ53G44 452 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 CMPK2Q5EBM0 449 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 RNFT1Q5M7Z0 435 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 WBP2NLQ6ICG8 309 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 TMEM234Q8WY98 164 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 IL1RAPQ9NPH3 570 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ARMC1Q9NVT9 282 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
USP44-202ENST00000393091 OR5F1O95221 314 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 SLC1A3P43003 542 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 TRILQ7L0X0 811 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 OLIG3Q7RTU3 272 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 PHOSPHO1Q8TCT1 267 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 UGT2B28Q9BY64 529 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 FBXL2Q9UKC9 423 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 SLC9A8Q9Y2E8 581 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 HEATR5AQ86XA9 2040 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 IGF2RP11717 2491 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 A0A0B4J2E0 115 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 A0A1B0GX12 115 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 TPST2O60704 377 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 EDN3P14138 238 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 NQO1P15559 274 aaKnown RBP12.03□□□□□ -0.48
USP44-202ENST00000393091 RBM34P42696 430 aaKnown RBP12.03□□□□□ -0.48
USP44-202ENST00000393091 LIMS1P48059 325 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 HMGA2P52926 109 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 GRINAQ7Z429 371 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 OR4D11Q8NGI4 311 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
USP44-202ENST00000393091 SLC19A3Q9BZV2 496 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 PRDM14Q9GZV8 571 aa12.03□□□□□ -0.48
USP44-202ENST00000393091 ACACAQ13085 2346 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 GMNNO75496 209 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 RFPL3SP0C7P2 107 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 ACTR3P61158 418 aa12.02□□□□□ -0.48
USP44-202ENST00000393091 GLIPR1L2Q4G1C9 344 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms