RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PSMA4P25789 261 aaKnown RBP11.42□□□□□ -0.58
GGPS1-203ENST00000391855 FUT5Q11128 374 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 GNA13Q14344 377 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 CBLN3Q6UW01 205 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 FRRS1Q6ZNA5 592 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 DMRTC2Q8IXT2 367 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-203ENST00000391855 CMIPQ8IY22 773 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 OR5M1Q8NGP8 315 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 TMEM234Q8WY98 164 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 SMPDL3BQ92485 455 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 RNASE6Q93091 150 aaKnown RBP11.42□□□□□ -0.58
GGPS1-203ENST00000391855 RNF145Q96MT1 663 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 PINK1Q9BXM7 581 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 TRIM8Q9BZR9 551 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 TPT1P8Q9HAU6 139 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 MED4Q9NPJ6 270 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-203ENST00000391855 MRGBPQ9NV56 204 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 P2RX2Q9UBL9 471 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 KCNN3Q9UGI6 736 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 L3MBTL1Q9Y468 752 aa11.42□□□□□ -0.58
GGPS1-203ENST00000391855 HCFC1P51610 2035 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 UNC79Q9P2D8 2635 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 A0A096LPI6 279 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 TMEM247A6NEH6 219 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 ETV2O00321 342 aaPredicted RBP11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SYT5O00445 386 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 H6PDO95479 791 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SNRPB2P08579 225 aaKnown RBP11.41□□□□□ -0.58
GGPS1-203ENST00000391855 NR2F1P10589 423 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 PGCP20142 388 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 CCR4P51679 360 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 CASP9P55211 416 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 CLDN15P56746 228 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 CLDN20P56880 219 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 FOXF1Q12946 379 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 FADDQ13158 208 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SELENBP1Q13228 472 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SKP2Q13309 424 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SGCBQ16585 318 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SLC25A53Q5H9E4 307 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 POMZP3Q6PJE2 187 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 GGNQ86UU5 652 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 KIF18BQ86Y91 864 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 FAM71CQ8NEG0 241 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 GPR119Q8TDV5 335 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 ST8SIA1Q92185 356 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 GTF2H4Q92759 462 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 VPS33AQ96AX1 596 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 SPDL1Q96EA4 605 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 ADGRG7Q96K78 797 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 EXOSC3Q9NQT5 275 aaKnown RBP11.41□□□□□ -0.58
GGPS1-203ENST00000391855 KCNE5Q9UJ90 142 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 PRDM4Q9UKN5 801 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 PACSIN3Q9UKS6 424 aa11.41□□□□□ -0.58
GGPS1-203ENST00000391855 MCTS1Q9ULC4 181 aaKnown RBP11.41□□□□□ -0.58
GGPS1-203ENST00000391855 DOCK7Q96N67 2140 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 SHISA8B8ZZ34 492 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 EEF1E1-BLOC1S5C9J1V9 151 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 NR5A2O00482 541 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 EIF1AYO14602 144 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 ADAMDEC1O15204 470 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 EEF1E1O43324 174 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 OIP5O43482 229 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 DNAJA2O60884 412 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 SYNGR4O95473 234 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 NTN1O95631 604 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 TGM6O95932 706 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 TROVE2P10155 538 aaKnown RBP eCLIP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 PRKCAP17252 672 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 PPIBP23284 216 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 EIF1AXP47813 144 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 SLC6A8P48029 635 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 SUCLG1P53597 346 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 MVDP53602 400 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 CRISP3P54108 245 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 DSTNP60981 165 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 SORDQ00796 357 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 CHRNEQ04844 493 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 PON3Q15166 354 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 QPRTQ15274 297 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 ZSWIM7Q19AV6 140 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 LRIF1Q5T3J3 769 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 METTL21CQ5VZV1 264 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 OR2V1Q8NHB1 315 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 POC1BQ8TC44 478 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 PNPT1Q8TCS8 783 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 INTS12Q96CB8 462 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 SLC38A1Q9H2H9 487 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 MTHFD2LQ9H903 347 aaPredicted RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 RNF122Q9H9V4 155 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 CACYBPQ9HB71 228 aaKnown RBP11.4□□□□□ -0.58
GGPS1-203ENST00000391855 TIGARQ9NQ88 270 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 ZNF446Q9NWS9 450 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 JKAMPQ9P055 326 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 CCDC167Q9P0B6 97 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms