RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZNF808Q8N4W9 903 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-202ENST00000380747 TMCO5AQ8N6Q1 288 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 ANKFN1Q8N957 763 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 OR10Q1Q8NGQ4 319 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 SMPDL3BQ92485 455 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 RND1Q92730 232 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 GTF2H4Q92759 462 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 SDCCAG3Q96C92 435 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 AURKBQ96GD4 344 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-202ENST00000380747 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 LURAP1Q96LR2 239 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 TRIB1Q96RU8 372 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF350Q9GZX5 532 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 PAIP1Q9H074 479 aaKnown RBP8.36□□□□□ -1.07
HMGN1-202ENST00000380747 TPT1P8Q9HAU6 139 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 TMEM45AQ9NWC5 275 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 COQ3Q9NZJ6 369 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 CARD8Q9Y2G2 431 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 MRPS18CQ9Y3D5 142 aaKnown RBP8.36□□□□□ -1.07
HMGN1-202ENST00000380747 DTNAQ9Y4J8 743 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 FAM215AQ9Y5M1 114 aa8.36□□□□□ -1.07
HMGN1-202ENST00000380747 NCKAP5O14513 1909 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ZGRF1Q86YA3 2104 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 A0A087WZY1 265 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 A0A1W2PP18 115 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 OR2M5A3KFT3 312 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 PRAMEF27A3QJZ7 478 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 SERINC4A6NH21 518 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 AHRRA9YTQ3 701 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 NPIPB9F8W1W9 429 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 H3BML4 177 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 KIAA0513O60268 411 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 UGT2B17O75795 530 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 CYP7B1O75881 506 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 H6PDO95479 791 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 NUDT14O95848 222 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 HOXD4P09016 255 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 GLI4P10075 376 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 UBL4AP11441 157 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 CHMP24386 653 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 CCR4P51679 360 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF41P51814 821 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 GFRA1P56159 465 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 B3GALT5-AS1P59052 145 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 DSTNP60981 165 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF117Q03924 483 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.072e-7■■■■□ 20.5
HMGN1-202ENST00000380747 ZNF141Q15928 474 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 SYPL1Q16563 259 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 GLYR1Q49A26 553 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ACSF3Q4G176 576 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 PAGE3Q5JUK9 113 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 TYW3Q6IPR3 259 aaKnown RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ARSKQ6UWY0 536 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 SPNS3Q6ZMD2 512 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 FRRS1Q6ZNA5 592 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 CHMP1BQ7LBR1 199 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 CCDC71Q8IV32 467 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 UBQLNLQ8IYU4 475 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF619Q8N2I2 560 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 KLHDC3Q9BQ90 382 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 PIGQQ9BRB3 760 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 TTYH2Q9BSA4 534 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 NMUR2Q9GZQ4 415 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF385DQ9H6B1 395 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 CHST11Q9NPF2 352 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 POLE3Q9NRF9 147 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 MED17Q9NVC6 651 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 P2RX2Q9UBL9 471 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 KCNE5Q9UJ90 142 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 LEF1Q9UJU2 399 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-202ENST00000380747 LIPT1Q9Y234 373 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 RNF6Q9Y252 685 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 MED13LQ71F56 2210 aa8.35□□□□□ -1.07
HMGN1-202ENST00000380747 NINQ8N4C6 2090 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF469Q96JG9 3925 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-202ENST00000380747 CENPVL1A0A0U1RR11 272 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 TMEM247A6NEH6 219 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 FAM90A27PA6NNH2 459 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 KDM4EB2RXH2 506 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-202ENST00000380747 CLIC1O00299 241 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 DYNC1I1O14576 645 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 ANGPT2O15123 496 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF264O43296 627 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 SEC14L5O43304 696 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 CLDN14O95500 239 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 EPPINO95925 133 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 CSTAP01040 98 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 BCHEP06276 602 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 CHRM4P08173 479 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 SNRPB2P08579 225 aaKnown RBP8.34□□□□□ -1.07
HMGN1-202ENST00000380747 UBTFL6P0CB48 400 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-202ENST00000380747 BMP4P12644 408 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 PEPDP12955 493 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 CPN1P15169 458 aa8.34□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF708P17019 499 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms