RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 NR4A2P43354 598 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 ENTPD8Q5MY95 495 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 ELP2Q6IA86 826 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 MEPCEQ7L2J0 689 aaKnown RBP15.06■□□□□ 0
COL2A1-202ENST00000380518 SGPP2Q8IWX5 399 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 MRPL43Q8N983 215 aaKnown RBP15.06■□□□□ 0
COL2A1-202ENST00000380518 FGF13Q92913 245 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 C20orf27Q9GZN8 174 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 SLC25A18Q9H1K4 315 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 OR51J1Q9H342 316 aa15.06■□□□□ 0
COL2A1-202ENST00000380518 C17orf113A0A1B0GUU1 675 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 SLC9B1P1A6NJY1 282 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 IL1AP01583 271 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 ALPLP05186 524 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 HOXD9P28356 352 aaPredicted RBP15.05■□□□□ 0
COL2A1-202ENST00000380518 AQP2P41181 271 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 CASP6P55212 293 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 ZNF322Q6U7Q0 402 aaPredicted RBP15.05■□□□□ 0
COL2A1-202ENST00000380518 NOXA1Q86UR1 476 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 HHLA2Q9UM44 414 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 V9GY05 133 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 F5H5K5 113 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 DCNP07585 359 aaKnown RBP15.05■□□□□ 0
COL2A1-202ENST00000380518 CDK4P11802 303 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 CPMP14384 443 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 GM2AP17900 193 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 PSMB10P40306 273 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 DEFB103AP81534 67 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 CTBSQ01459 385 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 ZNF91Q05481 1191 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 MGAT3Q09327 533 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 ZNF765Q7L2R6 523 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 RETREG3Q86VR2 466 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 CMTM1Q8IZ96 169 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 HORMAD2Q8N7B1 307 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 C4orf36Q96KX1 117 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 ADOQ96SZ5 270 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 HINT2Q9BX68 163 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 ZNF337Q9Y3M9 751 aa15.05■□□□□ 0
COL2A1-202ENST00000380518 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 H0YIV9 168 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 SULT2B1O00204 365 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 ACP2P11117 423 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 SSTR4P31391 388 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 PTGER1P34995 402 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 GJA5P36382 358 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 HTR3AP46098 478 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 SRYQ05066 204 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 GPR139Q6DWJ6 353 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 NPRL2Q8WTW4 380 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 GGHQ92820 318 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 SACM1LQ9NTJ5 587 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 ZNF443Q9Y2A4 671 aaPredicted RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 UBFD1O14562 309 aaKnown RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 ARPC1BO15143 372 aaKnown RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 C1SP09871 688 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 GABRB3P28472 473 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 PSPHP78330 225 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 SELPLGQ14242 412 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 EXOSC7Q15024 291 aaKnown RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 LRRC56Q8IYG6 542 aaPredicted RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 FAM83FQ8NEG4 500 aaPredicted RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 BRIX1Q8TDN6 353 aaKnown RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 MYEF2Q9P2K5 600 aaKnown RBP15.05■□□□□ -0
COL2A1-202ENST00000380518 RASD1Q9Y272 281 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 MYH7BA7E2Y1 1941 aa15.05■□□□□ -0
COL2A1-202ENST00000380518 LOC105369274A0A096LPK9 316 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 PRSS38A1L453 326 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 TVP23AA6NH52 213 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CLDN24A6NM45 220 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ZNF28P17035 718 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ALKAL1Q6UXT8 129 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 COMMD7Q86VX2 200 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 OR4N4Q8N0Y3 316 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 OR8J2Q8NGG1 315 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ABHD5Q8WTS1 349 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ZNF486Q96H40 463 aaPredicted RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 LMAN1LQ9HAT1 526 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 STARD5Q9NSY2 213 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CPNE7Q9UBL6 633 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 BLACEA4D250 179 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 TSPAN15O95858 294 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 BMP4P12644 408 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ARSBP15848 533 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CST5P28325 142 aaPredicted RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 AKR1C8PQ5T2L2 129 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CCNJQ5T5M9 372 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 VRK2Q86Y07 508 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 NLGN4YQ8NFZ3 816 aaPredicted RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 SYNPRQ8TBG9 265 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 NT5DC2Q9H857 520 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CXXC1Q9P0U4 656 aaPredicted RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 GON4LQ3T8J9 2241 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 FAM183AA6NL82 134 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 F3P13726 295 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 PSMB5P28074 263 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CAV2P51636 162 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 KCNJ10P78508 379 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 OR7A5Q15622 319 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 DEFB133Q30KQ1 61 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms