RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 NEURL1O76050 574 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 IFNW1P05000 195 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 SP1P08047 785 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 NME2P22392 152 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
UPK1A-202ENST00000379013 KCNJ5P48544 419 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 COPZ1P61923 177 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 CHRNB3Q05901 458 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 CBFBQ13951 182 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 IFI44LQ53G44 452 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 ZNF766Q5HY98 468 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 CYP2R1Q6VVX0 501 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 ZNF836Q6ZNA1 936 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 CYP4Z1Q86W10 505 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 SPPL2CQ8IUH8 684 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 TMCO5AQ8N6Q1 288 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 GRHL3Q8TE85 626 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 STMN2Q93045 179 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 TAMM41Q96BW9 452 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 NODALQ96S42 347 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 POLR2J2Q9GZM3 115 aaKnown RBP12.66□□□□□ -0.38
UPK1A-202ENST00000379013 LAT2Q9GZY6 243 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 QRSL1Q9H0R6 528 aaKnown RBP12.66□□□□□ -0.38
UPK1A-202ENST00000379013 POLR2J3Q9H1A7 115 aaKnown RBP12.66□□□□□ -0.38
UPK1A-202ENST00000379013 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
UPK1A-202ENST00000379013 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
UPK1A-202ENST00000379013 USP22Q9UPT9 525 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 LRBAP50851 2863 aa12.66□□□□□ -0.38
UPK1A-202ENST00000379013 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 DHRS12A0PJE2 317 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 H0YHG0 523 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 AP3D1O14617 1153 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 HCRTR2O43614 444 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 FMO6PO60774 539 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 OPN1SWP03999 348 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 FESP07332 822 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 CCL3P10147 92 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 PGCP20142 388 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 P2RX1P51575 399 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 ZNF41P51814 821 aaPredicted RBP12.65□□□□□ -0.38
UPK1A-202ENST00000379013 RGS8P57771 180 aaPredicted RBP12.65□□□□□ -0.38
UPK1A-202ENST00000379013 EEF1A1P68104 462 aaKnown RBP12.65□□□□□ -0.38
UPK1A-202ENST00000379013 DMTNQ08495 405 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 ZNF169Q14929 603 aaPredicted RBP12.65□□□□□ -0.38
UPK1A-202ENST00000379013 ZNF468Q5VIY5 522 aaPredicted RBP12.65□□□□□ -0.38
UPK1A-202ENST00000379013 PRAMEF20Q5VT98 475 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 ZFP1Q6P2D0 407 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 VRK2Q86Y07 508 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 SMYD1Q8NB12 490 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 FAM71CQ8NEG0 241 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 OR4K17Q8NGC6 315 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 B4GALNT2Q8NHY0 566 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 TMEM234Q8WY98 164 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 SCMH1Q96GD3 660 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 PYURFQ96I23 114 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 HSH2DQ96JZ2 352 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 FRMD6Q96NE9 622 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 TAAR6Q96RI8 345 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 SELENONQ9NZV5 590 aa12.65□□□□□ -0.38
UPK1A-202ENST00000379013 PCNX1Q96RV3 2341 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 IGLV3-32A0A0A0MS00 114 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 FAAHO00519 579 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 SNPHO15079 494 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 CBR3O75828 277 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 CYP7B1O75881 506 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 NUDT14O95848 222 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 LGI1O95970 557 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
UPK1A-202ENST00000379013 ATP6V1B2P21281 511 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 GCKP35557 465 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 CCR4P51679 360 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 ACTR3P61158 418 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 MS4A2Q01362 244 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 MAPK14Q16539 360 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 FNDC7Q5VTL7 733 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 SPINK14Q6IE38 97 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 MDGA2Q7Z553 956 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 MARCH3Q86UD3 253 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 PLCZ1Q86YW0 608 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 SLC47A1Q96FL8 570 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 SIGLEC12Q96PQ1 595 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF559Q9BR84 538 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 ZFP64Q9NPA5 681 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 ERRFI1Q9UJM3 462 aaPredicted RBP12.64□□□□□ -0.39
UPK1A-202ENST00000379013 SH3GLB1Q9Y371 365 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 FAM32AQ9Y421 112 aaKnown RBP12.64□□□□□ -0.39
UPK1A-202ENST00000379013 HEATR5AQ86XA9 2040 aa12.64□□□□□ -0.39
UPK1A-202ENST00000379013 A0A087WZY1 265 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 ANKUB1A6NFN9 424 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 GCM2O75603 506 aaPredicted RBP12.63□□□□□ -0.39
UPK1A-202ENST00000379013 PRKD3O94806 890 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 FABP3P05413 133 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 RAP2AP10114 183 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 FCGR1AP12314 374 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms