RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ALS2Q96Q42 1657 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 IFNA2P01563 188 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 CD27P26842 260 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 TPMTP51580 245 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 GABARAPL2P60520 117 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 MZT1Q08AG7 82 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 DUSP6Q16828 381 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 ANKRD33Q7Z3H0 272 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 SERPINA11Q86U17 422 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 OR5L1Q8NGL2 311 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 ZNF775Q96BV0 537 aaPredicted RBP12.77□□□□□ -0.37
GPC6-201ENST00000377047 SYNPO2LQ9H987 977 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 MLXQ9UH92 298 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 GALR3O60755 368 aaPredicted RBP12.76□□□□□ -0.37
GPC6-201ENST00000377047 POU3F1Q03052 451 aaPredicted RBP12.76□□□□□ -0.37
GPC6-201ENST00000377047 ULBP2Q9BZM5 246 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 SLC16A7O60669 478 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 IGHG1P01857 330 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 SERPINA5P05154 406 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 LPLP06858 475 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 RGS6P49758 472 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 CFAP77Q6ZQR2 320 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 CNTN4Q8IWV2 1026 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 ZNF610Q8N9Z0 462 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 SENP5Q96HI0 755 aaPredicted RBP12.76□□□□□ -0.37
GPC6-201ENST00000377047 ACOT13Q9NPJ3 140 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
GPC6-201ENST00000377047 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 TRAV18A0A075B6X5 111 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 NPR2P20594 1047 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 PGM2L1Q6PCE3 622 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 C7orf34Q96L11 122 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 CDC6Q99741 560 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 TIAM2Q8IVF5 1701 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 AMY2AP04746 511 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 MMP12P39900 470 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 PSMB10P40306 273 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 RUNDC3AQ59EK9 446 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 RAB9BQ9NP90 201 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 FGF21Q9NSA1 209 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 PLEKHJ1Q9NW61 149 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 PDE4DIPQ5VU43 2346 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 MYO9BQ13459 2157 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 RP2O75695 350 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 S100A2P29034 98 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 MAP2K3P46734 347 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 SYPL1Q16563 259 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 TMEM176BQ3YBM2 270 aaPredicted RBP12.76□□□□□ -0.37
GPC6-201ENST00000377047 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
GPC6-201ENST00000377047 OR2S2Q9NQN1 319 aa12.76□□□□□ -0.37
GPC6-201ENST00000377047 GYPBP06028 91 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 DBHP09172 617 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 HOXA9P31269 272 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 CPOXP36551 454 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 MAGEA6P43360 314 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 CCDC58Q4VC31 144 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 ASB16Q96NS5 453 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 SORT1Q99523 831 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 MGAT4CQ9UBM8 478 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 SNTB2Q13425 540 aaKnown RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 TAZQ16635 292 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 ATOH8Q96SQ7 321 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 TREX2Q9BQ50 279 aaPredicted RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 ST6GALNAC5Q9BVH7 336 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 SUSD5O60279 629 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 SLC43A1O75387 559 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 EPHA1P21709 976 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 SYNPOQ8N3V7 929 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 C3orf30Q96M34 536 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 TM7SF3Q9NS93 570 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 TIMM8BQ9Y5J9 83 aaPredicted RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 KDM4EB2RXH2 506 aaPredicted RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 EEF1E1-BLOC1S5C9J1V9 151 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 GABRR1P24046 479 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 RAB15P59190 212 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 VASNQ6EMK4 673 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 ZNF534Q76KX8 674 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 CHPT1Q8WUD6 406 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 PDLIM5Q96HC4 596 aaKnown RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 EGLN2Q96KS0 407 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 CLMPQ9H6B4 373 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 TMEM45AQ9NWC5 275 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 DNAJB5O75953 348 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 CHMP24386 653 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 IMPA1P29218 277 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 TMEM52BQ4KMG9 183 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 METTL4Q8N3J2 472 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 ADAMTS16Q8TE57 1224 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 DUSP19Q8WTR2 217 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 DCAF13Q9NV06 445 aaKnown RBP12.75□□□□□ -0.37
GPC6-201ENST00000377047 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 B3GNT2Q9NY97 397 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms