RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 PRDX6P30041 224 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 LHX2P50458 406 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 PER3P56645 1201 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 CDK6Q00534 326 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 NANOGP8Q6NSW7 305 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 MTFR2Q6P444 385 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 ENPP6Q6UWR7 440 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 PTOV1Q86YD1 416 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 ULK2Q8IYT8 1036 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 GTPBP8Q8N3Z3 284 aaPredicted RBP20.49■□□□□ 0.87
YIF1A-202ENST00000376899 ANKS4BQ8N8V4 417 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 NFKBIDQ8NI38 313 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 GPR119Q8TDV5 335 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 SLC39A3Q9BRY0 314 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 THUMPD3Q9BV44 507 aaKnown RBP20.49■□□□□ 0.87
YIF1A-202ENST00000376899 NANOGQ9H9S0 305 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 EXOSC3Q9NQT5 275 aaKnown RBP20.49■□□□□ 0.87
YIF1A-202ENST00000376899 GID8Q9NWU2 228 aa20.49■□□□□ 0.87
YIF1A-202ENST00000376899 USP9XQ93008 2570 aaPredicted RBP20.48■□□□□ 0.87
YIF1A-202ENST00000376899 CLDN24A6NM45 220 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 FAM47E-STBD1D6RA91 191 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 PGM3O95394 542 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 THBS1P07996 1170 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 UBTFL6P0CB48 400 aaPredicted RBP20.48■□□□□ 0.87
YIF1A-202ENST00000376899 ETS2P15036 469 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 IL7RP16871 459 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 TCEA1P23193 301 aaKnown RBP20.48■□□□□ 0.87
YIF1A-202ENST00000376899 PSMA4P25789 261 aaKnown RBP20.48■□□□□ 0.87
YIF1A-202ENST00000376899 ACVR2AP27037 513 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 PTGER4P35408 488 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 RBBP4Q09028 425 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 CBFBQ13951 182 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 BCL2A1Q16548 175 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 LIN52Q52LA3 116 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 REEP3Q6NUK4 255 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 ZNF585AQ6P3V2 769 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 C3P1Q6ZMU1 363 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 SERPINA11Q86U17 422 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 SSC4DQ8WTU2 575 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 CCDC120Q96HB5 630 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 NPAS1Q99742 590 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 SH3GL1Q99961 368 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 FAM215AQ9Y5M1 114 aa20.48■□□□□ 0.87
YIF1A-202ENST00000376899 AHRRA9YTQ3 701 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 C5orf58C9J3I9 102 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 ETV2O00321 342 aaPredicted RBP20.47■□□□□ 0.87
YIF1A-202ENST00000376899 RNF224P0DH78 156 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 ZNF708P17019 499 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 GZMMP51124 257 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 CLDN18P56856 261 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 SCARB2Q14108 478 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 SLC25A53Q5H9E4 307 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 RNF220Q5VTB9 566 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 FAM91A1Q658Y4 838 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 RTL6Q6ICC9 239 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 VRK2Q86Y07 508 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 MARVELD2Q8N4S9 558 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 OR52P1PQ8NH57 321 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 POC1BQ8TC44 478 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 SPATA9Q9BWV2 254 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 DNAJB12Q9NXW2 375 aaKnown RBP20.47■□□□□ 0.87
YIF1A-202ENST00000376899 ZNF443Q9Y2A4 671 aaPredicted RBP20.47■□□□□ 0.87
YIF1A-202ENST00000376899 IFT52Q9Y366 437 aa20.47■□□□□ 0.87
YIF1A-202ENST00000376899 SHISA8B8ZZ34 492 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 DCTN3O75935 186 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 NTN1O95631 604 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ESRRAP11474 423 aaPredicted RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 PEPDP12955 493 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 EIF1P41567 113 aaKnown RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 STARP49675 285 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 EEF1A1P68104 462 aaKnown RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ADORA2A-AS1P86434 159 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 TOMM34Q15785 309 aaPredicted RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 CYP51A1Q16850 503 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ZSWIM7Q19AV6 140 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ACSF3Q4G176 576 aaPredicted RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 RABL3Q5HYI8 236 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 MRPL2Q5T653 305 aaKnown RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 C1orf185Q5T7R7 199 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ZNF836Q6ZNA1 936 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 CALHM3Q86XJ0 350 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 GRAMD2AQ8IUY3 354 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ZZZ3Q8IYH5 903 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 RPRMLQ8N4K4 120 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 TMCO5AQ8N6Q1 288 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 C11orf65Q8NCR3 313 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 HIPK4Q8NE63 616 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 OR5M1Q8NGP8 315 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 OR10A6Q8NH74 314 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 CNOT9Q92600 299 aaKnown RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ZNF524Q96C55 264 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 CMTM5Q96DZ9 223 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 GPATCH1Q9BRR8 931 aaKnown RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 CAMK2AQ9UQM7 478 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 ZNF337Q9Y3M9 751 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 GPC6Q9Y625 555 aaPredicted RBP20.46■□□□□ 0.87
YIF1A-202ENST00000376899 AP4B1Q9Y6B7 739 aa20.46■□□□□ 0.87
YIF1A-202ENST00000376899 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.45■□□□□ 0.86
YIF1A-202ENST00000376899 CDHR4A6H8M9 788 aa20.45■□□□□ 0.86
YIF1A-202ENST00000376899 CYP7B1O75881 506 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms