RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PTTG1O95997 202 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 APOA1P02647 267 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 CD63P08962 238 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 OCM2P0CE71 109 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 OCMP0CE72 109 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 HSMCR30P0CW71 290 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 HPGDP15428 266 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 NAGAP17050 411 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 GADD45AP24522 165 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 CD1CP29017 333 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 ATP6V1E1P36543 226 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 RANBP1P43487 201 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 GCGRP47871 477 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 BLVRAP53004 296 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 UBXN2BQ14CS0 331 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 OXA1LQ15070 435 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 HSPB2Q16082 182 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 INAQ16352 499 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TRIM16LQ309B1 348 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF750Q32MQ0 723 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 KLHL26Q53HC5 615 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM236Q5W0B7 351 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 WBP2NLQ6ICG8 309 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 ACSM5Q6NUN0 579 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 DPY19L2P2Q6ZN68 376 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 Q6ZPB1 254 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 DCDC5Q6ZRR9 648 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 Q6ZS52 159 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 KCTD20Q7Z5Y7 419 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TPRA1Q86W33 373 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 PHC2Q8IXK0 858 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 NRMQ8IXM6 262 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 MS4A15Q8N5U1 240 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC15A4Q8N697 577 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 PLPP5Q8NEB5 264 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 OR9A4Q8NGU2 314 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TP53INP1Q96A56 240 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TMCO6Q96DC7 493 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 RNFT2Q96EX2 444 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 MMABQ96EY8 250 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM46AQ96IP4 442 aaKnown RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 OPALINQ96PE5 141 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 GPX7Q96SL4 187 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 MAP3K3Q99759 626 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 PRSS27Q9BQR3 290 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 MRI1Q9BV20 369 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 RSPO3Q9BXY4 272 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 UBQLN3Q9H347 655 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 SYNPO2LQ9H987 977 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM60AQ9NP50 221 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TRIM36Q9NQ86 728 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 SOHLH2Q9NX45 425 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 LRIT1Q9P2V4 623 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TNFRSF10DQ9UBN6 386 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 ADAM30Q9UKF2 790 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 ICAM5Q9UMF0 924 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 OR10H1Q9Y4A9 318 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A087WUJ7 227 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A0A6YYC8 382 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 GXYLT2A0PJZ3 443 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 PRR23D1E9PI22 279 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 I3L1I5 382 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SCDO00767 359 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 BHLHE40O14503 412 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CSO75390 466 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 UPK1BO75841 260 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 OR2B3O76000 313 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SOX14O95416 240 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 PRR23D2P0DMB1 279 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 IFI30P13284 250 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 PVRP15151 417 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 TYRP1P17643 537 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 TBXA2RP21731 343 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 FKBP2P26885 142 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SOX18P35713 384 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 OPRL1P41146 370 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC1A3P43003 542 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 HTR3AP46098 478 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 FNTBP49356 437 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 NUDT6P53370 316 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 PNLIPRP2P54317 469 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 NCS1P62166 190 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ACTA2P62736 377 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ACTG2P63267 376 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 TSTQ16762 297 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CCDC58Q4VC31 144 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ALG10BQ5I7T1 473 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 MZT2AQ6P582 158 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 CXXC5Q7LFL8 322 aaKnown RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 KIF18BQ86Y91 864 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 NKAIN4Q8IVV8 208 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 OR4N5Q8IXE1 308 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 SYS1Q8N2H4 156 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF615Q8N8J6 731 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM181AQ8N9Y4 354 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 TEX19Q8NA77 164 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 DRAXINQ8NBI3 349 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 FAM71CQ8NEG0 241 aa8.05□□□□□ -1.12
SNRNP40-202ENST00000373720 OR6S1Q8NH40 331 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms