RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 C1QBP02746 253 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 LIPCP11150 499 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 PGCP20142 388 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 SLC2A5P22732 501 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 SHC1P29353 583 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 TAS2R31P59538 309 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HSD11B2P80365 405 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 CCINQ13939 588 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HYAL4Q2M3T9 481 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 TMEM225Q6GV28 225 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 RIMKLAQ8IXN7 391 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ZIC5Q96T25 663 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 KLF16Q9BXK1 252 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ATXN7L1Q9ULK2 861 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 LTBP3Q9NS15 1303 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 C1orf105O95561 183 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 SYN1P17600 705 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HOXC13P31276 330 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ASAH1Q13510 395 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ACOT4Q8N9L9 421 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 DUSP21Q9H596 190 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF443Q9Y2A4 671 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 PKD1L3Q7Z443 1732 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 RAB40ALP0C0E4 278 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HOXD9P28356 352 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 BEX5Q5H9J7 111 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 GLB1L2Q8IW92 636 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 RAB40AQ8WXH6 277 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 FAM83CQ9BQN1 747 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 GABARAPL1Q9H0R8 117 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 B3GAT2Q9NPZ5 323 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 LCMT2O60294 686 aaKnown RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 PIP5K1CO60331 668 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 CDK2P24941 298 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 PLCXD2Q0VAA5 305 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SGCAQ16586 387 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ESX1Q8N693 406 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SLC25A46Q96AG3 418 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 YIPF6Q96EC8 236 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 PGAM5Q96HS1 289 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 TMEM121BQ9BXQ6 578 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 IL21RQ9HBE5 538 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 MED17Q9NVC6 651 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ASIC5Q9NY37 505 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 FOXE1O00358 373 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 DBPQ10586 325 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 C18orf63Q68DL7 685 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 RNF111Q6ZNA4 994 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 MAMDC2Q7Z304 686 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 TM9SF4Q92544 642 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF566Q969W8 418 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF587Q96SQ5 575 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 MACROD1Q9BQ69 325 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SULT4A1Q9BR01 284 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 NEURL2Q9BR09 285 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 HIF3AQ9Y2N7 669 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SGCBQ16585 318 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SLX4IPQ5VYV7 408 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF454Q8N9F8 522 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 AVL9Q8NBF6 648 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ACBD4Q8NC06 268 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SMAP2Q8WU79 429 aaPredicted RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 MED20Q9H944 212 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 LSM5Q9Y4Y9 91 aaKnown RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 MAST2Q6P0Q8 1798 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SBK3P0C264 359 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SUOXP51687 545 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 IL13RA1P78552 427 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 LTBQ06643 244 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 CARD17Q5XLA6 110 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 OLIG1Q8TAK6 271 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 NECTIN4Q96NY8 510 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SERINC2Q96SA4 455 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 PRRT1Q99946 306 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 C1GALT1Q9NS00 363 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 TRDV1A0A1B0GX56 115 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 UBL3O95164 117 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 KNG1P01042 644 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 CSNK1DP48730 415 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 TRA2BP62995 288 aaKnown RBP14.93□□□□□ -0.02
COL17A1-202ENST00000369733 DHCR24Q15392 516 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 DCST2Q5T1A1 773 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF585AQ6P3V2 769 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 IL17RDQ8NFM7 739 aa14.93□□□□□ -0.02
COL17A1-202ENST00000369733 SLC9B1P1A6NJY1 282 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 GAPDHSO14556 408 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 HRGP04196 525 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF888P0CJ79 500 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 HLA-DMAP28067 261 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 SLC26A5P58743 744 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 SNRPGP62308 76 aaKnown RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 CSNK2A1P68400 391 aaPredicted RBP14.92□□□□□ -0.02
COL17A1-202ENST00000369733 GALK2Q01415 458 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF709Q8N972 641 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 CSNK2A3Q8NEV1 391 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 SMARCD2Q92925 531 aa14.92□□□□□ -0.02
COL17A1-202ENST00000369733 OR5B12Q96R08 314 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms