RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 RGPD3A6NKT7 1758 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 RGPD4Q7Z3J3 1758 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CNOT1A5YKK6 2376 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 SLC33A1O00400 549 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 FADS1O60427 444 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 GPR37L1O60883 481 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 RNGTTO60942 597 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 SDC3O75056 442 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 HMGN2P05204 90 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 DCNP07585 359 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 GDNFP39905 211 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PBX2P40425 430 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 EPHA5P54756 1037 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 SIM1P81133 766 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 TNFRSF17Q02223 184 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 SLC22A10Q63ZE4 541 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ALG1LQ6GMV1 187 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 GAREM2Q75VX8 874 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 GPR155Q7Z3F1 870 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CMIPQ8IY22 773 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ZNF248Q8NDW4 579 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 SDR9C7Q8NEX9 313 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 HAVCR2Q8TDQ0 301 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 LINC01599Q8WXQ3 324 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 GLYATL1Q969I3 302 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 TMEM41AQ96HV5 264 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 MS4A7Q9GZW8 240 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 GDE1Q9NZC3 331 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 KLHL9Q9P2J3 617 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 MRTO4Q9UKD2 239 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 HYKKA2RU49 373 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 DCDC2BA2VCK2 349 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CLDN4O14493 209 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ATG12O94817 140 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ANXA7P20073 488 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 NFYAP23511 347 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 SLC1A3P43003 542 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 TAP2Q03519 686 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 DEFB134Q4QY38 66 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 TMEM31Q5JXX7 168 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 NUP43Q8NFH3 380 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 OR10H5Q8NGA6 315 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 OR52I1Q8NGK6 324 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 SLC38A5Q8WUX1 472 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 METTL2AQ96IZ6 378 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 KATNB1Q9BVA0 655 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PARPBPQ9NWS1 579 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 TRAV27A0A087WT01 109 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 C1orf196B1AJZ1 125 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 MAN2B1O00754 1011 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PRKRAO75569 313 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 SNRNP70P08621 437 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 CBSLP0DN79 551 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 AOAHP28039 575 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CBSP35520 551 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CLCN7P51798 805 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CLDN2P57739 230 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 YOD1Q5VVQ6 348 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 METTL11BQ5VVY1 283 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ACSM5Q6NUN0 579 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 LINC01465Q8N7H1 131 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 OR5P2Q8WZ92 322 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 DVL3Q92997 716 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 OPALINQ96PE5 141 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 HHIPQ96QV1 700 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PFDN5Q99471 154 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CDCA3Q99618 268 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 TREX2Q9BQ50 279 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 ZNF559Q9BR84 538 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 CRB3Q9BUF7 120 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 SLC12A9Q9BXP2 914 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PBX4Q9BYU1 374 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PARP12Q9H0J9 701 aaKnown RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 MKKSQ9NPJ1 570 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 POLE3Q9NRF9 147 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 ZNF226Q9NYT6 803 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 PCDHGA2Q9Y5H1 932 aa10.13□□□□□ -0.79
EBF3-202ENST00000368648 EP300Q09472 2414 aaPredicted RBP10.13□□□□□ -0.79
EBF3-202ENST00000368648 RIF1Q5UIP0 2472 aaKnown RBP10.12□□□□□ -0.79
EBF3-202ENST00000368648 F5H5P2 479 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 FBXO24O75426 580 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 SC5DO75845 299 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 SLC6A11P48066 632 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 CTSCP53634 463 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 OR10A3P58181 314 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 RPS21P63220 83 aaKnown RBP10.12□□□□□ -0.79
EBF3-202ENST00000368648 PLK5Q496M5 336 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 KCTD20Q7Z5Y7 419 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 VRK2Q86Y07 508 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 C10orf111Q8N326 155 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 SLC7A13Q8TCU3 470 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 SCP2D1Q9UJQ7 156 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 SLC6A14Q9UN76 642 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 CCDC88CQ9P219 2028 aa10.12□□□□□ -0.79
EBF3-202ENST00000368648 DDX60LQ5H9U9 1706 aaKnown RBP10.12□□□□□ -0.79
EBF3-202ENST00000368648 ZNF878C9JN71 531 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms