RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 TRGV4A0A0C4DH28 118 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 A0A0J9YXY3 114 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 A0A1B0GUH1 482 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 A8MVM7 634 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 E9PSI1 815 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 AP3D1O14617 1153 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SLC19A2O60779 497 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SCN2BO60939 215 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TADA2AO75478 443 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SNRNP200O75643 2136 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ZNF189O75820 626 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 RTN3O95197 1032 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SIX3O95343 332 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TSPAN13O95857 204 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 PRM2P04554 102 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 CD37P11049 281 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ZNF35P13682 527 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ETS1P14921 441 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 DESP17661 470 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TCP1P17987 556 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ABCB4P21439 1286 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 IGHV1-2P23083 117 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 F2RP25116 425 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SLC9A3P48764 834 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 VSX2P58304 361 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 HOXC5Q00444 222 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 MAMLD1Q13495 774 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 IHHQ14623 411 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TMEM241Q24JQ0 296 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ZCWPW2Q504Y3 356 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 IGSF11Q5DX21 431 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 RNF187Q5TA31 235 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 RNF165Q6ZSG1 346 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 USP50Q70EL3 339 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 GET4Q7L5D6 327 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 STRADAQ7RTN6 431 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 C17orf82Q86X59 251 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 PRSS58Q8IYP2 241 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 DNAAF3Q8N9W5 541 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 FBXL13Q8NEE6 735 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 RGP1Q92546 391 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 MRGPRFQ96AM1 343 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 MAELQ96JY0 434 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 RBBP8Q99708 897 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TXNDC17Q9BRA2 123 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TMEM70Q9BUB7 260 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 PARP12Q9H0J9 701 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ATG10Q9H0Y0 220 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 KCNJ16Q9NPI9 418 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 BLOC1S4Q9NUP1 217 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 NLE1Q9NVX2 485 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 GPATCH2LQ9NWQ4 482 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 GDAP2Q9NXN4 497 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 UVRAGQ9P2Y5 699 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 MLXQ9UH92 298 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 IL36AQ9UHA7 158 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SLC7A8Q9UHI5 535 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 ZNF639Q9UID6 485 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 MMP17Q9ULZ9 603 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TMEM5Q9Y2B1 443 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TP53TG5Q9Y2B4 290 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 NME7Q9Y5B8 376 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 MPDZO75970 2070 aa-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 GOLGB1Q14789 3259 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 GOLGA4Q13439 2230 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 SCAF11Q99590 1463 aaKnown RBP-1.56□□□□□ -2.66
RNU6-228P-201ENST00000362700 TMEM221A6NGB7 291 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 RNF212BA8MTL3 300 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 TMCO5BA8MYB1 307 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 E7EWF7 191 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 H0YJW9 148 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 IPO5O00410 1097 aaKnown RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 NCR3O14931 201 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 SCAMP2O15127 329 aaKnown RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 SSSCA1O60232 199 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 CDH16O75309 829 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 MED24O75448 989 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 LCA5LO95447 670 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 IGLV7-43P04211 117 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 PCCBP05166 539 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 SFTPBP07988 381 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 CNPP09543 421 aaKnown RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 C8orf88P0DMB2 117 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 ERGP11308 486 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 GLULP15104 373 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 ME2P23368 584 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 PPP2R1AP30153 589 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 CTNNB1P35222 781 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 SPRR1AP35321 89 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 CD79BP40259 229 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 CSNK1EP49674 416 aaKnown RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 ASCL1P50553 236 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 ARHGDIBP52566 201 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 ZNF140P52738 457 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 RPL8P62917 257 aaKnown RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 MAT1AQ00266 395 aaKnown RBP-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 COX6A2Q02221 97 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 SIGLEC14Q08ET2 396 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 NEXNQ0ZGT2 675 aa-1.57□□□□□ -2.66
RNU6-228P-201ENST00000362700 TPBGQ13641 420 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms