RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ASF1BQ9NVP2 202 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4Q9UBX2 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 E9PI62 339 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 DPM1O60762 260 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF254O75437 659 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 IMPA1P29218 277 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TRIM23P36406 574 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 RAB13P51153 203 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 CCR8P51685 355 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 HMGA2P52926 109 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 STX4Q12846 297 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM115Q12893 351 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 C4orf46Q504U0 113 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 PIP5KL1Q5T9C9 394 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 C22orf39Q6P5X5 142 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 OVCH2Q7RTZ1 564 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM25Q86YD3 366 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 RASGRP3Q8IV61 690 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 PXT1Q8NFP0 134 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF480Q8WV37 535 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 HGDQ93099 445 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 ECHDC3Q96DC8 303 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 RNF208Q9H0X6 261 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 SLC25A18Q9H1K4 315 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 NTNG1Q9Y2I2 539 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF705EA8MWA4 302 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 PPM1DO15297 605 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 OR1F1O43749 312 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 GPR37L1O60883 481 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 RB1P06400 928 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 CD9P21926 228 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF750Q32MQ0 723 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM255AQ5JRV8 349 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 METTL11BQ5VVY1 283 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 RAB12Q6IQ22 244 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 CYB561A3Q8NBI2 242 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 OR51L1Q8NGJ5 315 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 NSMAFQ92636 917 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TRIM43Q96BQ3 446 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 GPN1Q9HCN4 374 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TREM1Q9NP99 234 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 SLC6A5Q9Y345 797 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 USP34Q70CQ2 3546 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 E9PQ18 207 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 FARS2O95363 451 aaKnown RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 LRG1P02750 347 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 GPR1P46091 355 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 PRMT2P55345 433 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 GMFBP60983 142 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 POLR2LP62875 67 aaKnown RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 MINDY4Q4G0A6 757 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM201Q5SNT2 666 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM99Q8N816 258 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 OR8S1Q8NH09 359 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 OR52I2Q8NH67 350 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 OR5W2Q8NH69 310 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 C3orf49Q96BT1 292 aa11.85□□□□□ -0.51
VAMP1-201ENST00000361716 GAS2L1Q99501 681 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 PRMT8Q9NR22 394 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-201ENST00000361716 PSMD9O00233 223 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 GNB5O14775 395 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 FOSL1P15407 271 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 PSMB5P28074 263 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 HLA-FP30511 346 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SSR2P43308 183 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SNRPEP62304 92 aaKnown RBP11.84□□□□□ -0.51
VAMP1-201ENST00000361716 PITPNAQ00169 270 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 ACSM3Q53FZ2 586 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 PRAMEF13Q5VWM6 474 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF322Q6U7Q0 402 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-201ENST00000361716 PRICKLE2Q7Z3G6 844 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 TMED4Q7Z7H5 227 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SIRT6Q8N6T7 355 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 UBTD2Q8WUN7 234 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 TAS2R10Q9NYW0 307 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 TSC2P49815 1807 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 TET1Q8NFU7 2136 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 GREB1Q4ZG55 1949 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 A8MXK9 166 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 CCL16O15467 120 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 STX11O75558 287 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SPP1P10451 314 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 HMGA1P17096 107 aaKnown RBP11.84□□□□□ -0.51
VAMP1-201ENST00000361716 LIMS1P48059 325 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 UBE2IP63279 158 aaKnown RBP11.84□□□□□ -0.51
VAMP1-201ENST00000361716 BLOC1S1P78537 153 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 C9orf64Q5T6V5 341 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SLC22A10Q63ZE4 541 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 GDPD4Q6W3E5 623 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 RAB11FIP2Q7L804 512 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 CCDC116Q8IYX3 515 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 CHCHD4Q8N4Q1 142 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 ACBD7Q8N6N7 88 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 OR1S1Q8NH92 325 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF461Q8TAF7 563 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SPATA5L1Q9BVQ7 753 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 SARGQ9BW04 601 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 KLF16Q9BXK1 252 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms