RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 FCRLAQ7L513 359 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 HAVCR2Q8TDQ0 301 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 HERVK_113Q902F9 699 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 CSF3RQ99062 836 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 SEMA4GQ9NTN9 838 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 A0A1W2PQ45 241 aaPredicted RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 A0A1W2PQY0 241 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 RPL34P49207 117 aaKnown RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 C6orf132Q5T0Z8 1188 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 ERN2Q76MJ5 926 aaKnown RBP13.1□□□□□ -0.31
SMC5-201ENST00000361138 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 CHST14Q8NCH0 376 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 CDC6Q99741 560 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 SPHK2Q9NRA0 654 aa13.1□□□□□ -0.31
SMC5-201ENST00000361138 FAM171A2A8MVW0 826 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SMAD6O43541 496 aaKnown RBP13.09□□□□□ -0.31
SMC5-201ENST00000361138 ETV5P41161 510 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 XCR1P46094 333 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 TGM4P49221 684 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 DEFB134Q4QY38 66 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 MFSD4AQ8N468 514 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 ABHD4Q8TB40 342 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 OR7D2Q96RA2 312 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SLC38A3Q99624 504 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SLC5A7Q9GZV3 580 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
SMC5-201ENST00000361138 PIP5K1CO60331 668 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 RAB5CP51148 216 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 LTBQ06643 244 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 LRFN4Q6PJG9 635 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 LNX2Q8N448 690 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 OR5AR1Q8NGP9 310 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 BTBD2Q9BX70 525 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 MVB12BQ9H7P6 319 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 IER3IP1Q9Y5U9 82 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 EGFP01133 1207 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 FURINP09958 794 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 PRPS1P60891 318 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 BEX5Q5H9J7 111 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 NXNL2Q5VZ03 156 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SIGIRRQ6IA17 410 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 LGALS14Q8TCE9 139 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 GPR148Q8TDV2 347 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 URM1Q9BTM9 101 aaKnown RBP13.09□□□□□ -0.31
SMC5-201ENST00000361138 TRAV27A0A087WT01 109 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CDHR4A6H8M9 788 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 GYPBP06028 91 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CD1EP15812 388 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 HTR1FP30939 366 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 MEF2DQ14814 521 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 BAK1Q16611 211 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 TOR2AQ5JU69 321 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 OR5H2Q8NGV7 314 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CDS1Q92903 461 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 MYADMQ96S97 322 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 TREX2Q9BQ50 279 aaPredicted RBP13.09□□□□□ -0.31
SMC5-201ENST00000361138 MYEF2Q9P2K5 600 aaKnown RBP13.09□□□□□ -0.31
SMC5-201ENST00000361138 TAF1P21675 1872 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 TXNL1O43396 289 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CA12O43570 354 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CDK2P24941 298 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 MASP1P48740 699 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 P2RX3P56373 397 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 FAHD1Q6P587 224 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CCDC190Q86UF4 302 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 RASGEF1AQ8N9B8 481 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 PRRT1Q99946 306 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 CAMK2AQ9UQM7 478 aa13.09□□□□□ -0.31
SMC5-201ENST00000361138 AGPAT2O15120 278 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 C6P13671 934 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 ELK1P19419 428 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 M6PRP20645 277 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 CSNK1DP48730 415 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 CLRN1P58418 232 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 TAS2R19P59542 299 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 CCINQ13939 588 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
SMC5-201ENST00000361138 ZMAT1Q5H9K5 638 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 RPL22L1Q6P5R6 122 aaKnown RBP13.08□□□□□ -0.32
SMC5-201ENST00000361138 HSD11B1LQ7Z5J1 315 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 ST8SIA4Q92187 359 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 FOXRED1Q96CU9 486 aaPredicted RBP13.08□□□□□ -0.32
SMC5-201ENST00000361138 OPALINQ96PE5 141 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms