RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SLC2A13Q96QE2 648 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 ALOXE3Q9BYJ1 711 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 HEMK1Q9Y5R4 338 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SMLR1H3BR10 107 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 CBX7O95931 251 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 MAOBP27338 520 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 DCTP40126 519 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 COX15Q7KZN9 410 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 ABHD12BQ7Z5M8 362 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 RSPRY1Q96DX4 576 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 APOA2P02652 100 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 UBBP0CG47 229 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 UBCP0CG48 685 aaKnown RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 TIMP2P16035 220 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 RPS5P46782 204 aaKnown RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 RPS15P62841 145 aaKnown RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 RPS27AP62979 156 aaKnown RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 UBA52P62987 128 aaKnown RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SLC10A1Q14973 349 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 NADSYN1Q6IA69 706 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 LYPD4Q6UWN0 246 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 FJX1Q86VR8 437 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 MAF1Q9H063 256 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SAP130Q9H0E3 1048 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 NAP1L6A6NFF2 107 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 GJE1A6NN92 205 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 CRABP1P29762 137 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF704Q6ZNC4 412 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-203ENST00000359759 NLRP8Q86W28 1048 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF417Q8TAU3 575 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 MIB2Q96AX9 1013 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 SLC6A16Q9GZN6 736 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 OR14J1Q9UGF5 321 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 MYH6P13533 1939 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 KIDINS220Q9ULH0 1771 aa15.09■□□□□ 0.01
COL18A1-203ENST00000359759 A0A1W2PQ09 198 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 C17orf105B2RV13 164 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 G3V2L1 256 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 DNAJB6O75190 326 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 AHRP35869 848 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 UBE2NLQ5JXB2 153 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 C9orf135Q5VTT2 229 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 ISCA2Q86U28 154 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 PRRT1Q99946 306 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 SLAMF7Q9NQ25 335 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 PLEK2Q9NYT0 353 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 SLCO3A1Q9UIG8 710 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 RARRES3Q9UL19 164 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 V9GY05 133 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 CA12O43570 354 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 GPR37L1O60883 481 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 DUSP3P51452 185 aaPredicted RBP15.08■□□□□ 0.01
COL18A1-203ENST00000359759 EPHA4P54764 986 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 LTBQ06643 244 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 SLC7A13Q8TCU3 470 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 LINC01599Q8WXQ3 324 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 TPPP3Q9BW30 176 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 TPSD1Q9BZJ3 242 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 HEBP1Q9NRV9 189 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 SLIT2O94813 1529 aa15.08■□□□□ 0.01
COL18A1-203ENST00000359759 TTLL8A6PVC2 850 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 EEF1A1P68104 462 aaKnown RBP15.08■□□□□ 0
COL18A1-203ENST00000359759 OR4Q3Q8NH05 313 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 BRI3BPQ8WY22 251 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PIGCQ92535 297 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 RAB7BQ96AH8 199 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 RBMXL1Q96E39 390 aaKnown RBP15.08■□□□□ 0
COL18A1-203ENST00000359759 OCSTAMPQ9BR26 566 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PAAF1Q9BRP4 392 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 NUDT22Q9BRQ3 303 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 OLAHQ9NV23 265 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 CEPT1Q9Y6K0 416 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 SLIT3O75094 1523 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PRAMEF27A3QJZ7 478 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 HEPACAM2A8MVW5 462 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PROS1P07225 676 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 MANEALQ5VSG8 457 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PRAMEF9Q5VWM5 478 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 KDELC1Q6UW63 502 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 OR5D14Q8NGL3 314 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 SERINC2Q96SA4 455 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 MKRN2Q9H000 416 aaKnown RBP15.08■□□□□ 0
COL18A1-203ENST00000359759 ANKMY1Q9P2S6 941 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PRAF2O60831 178 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 SPINT3P49223 89 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 NPWQ8N729 165 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 INTS14Q96SY0 518 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 SLC25A31Q9H0C2 315 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 OR10A5Q9H207 317 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 OR10A2Q9H208 303 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 PATZ1Q9HBE1 687 aaKnown RBP15.08■□□□□ 0
COL18A1-203ENST00000359759 FBXL2Q9UKC9 423 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 HIDE1A8MVS5 230 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 KDM4EB2RXH2 506 aaPredicted RBP15.08■□□□□ 0
COL18A1-203ENST00000359759 TUSC2O75896 110 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 NPBWR1P48145 328 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 OR9A4Q8NGU2 314 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 ARHGAP39Q9C0H5 1083 aa15.08■□□□□ 0
COL18A1-203ENST00000359759 STYXL1Q9Y6J8 313 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms