RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SLC25A36Q96CQ1 311 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 BARD1Q99728 777 aaKnown RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 DPH7Q9BTV6 452 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 DHRS4Q9BTZ2 278 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ALG8Q9BVK2 526 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 TDP1Q9NUW8 608 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 NT5EP21589 574 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 HYAL4Q2M3T9 481 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ATPAF1Q5TC12 328 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 USP51Q70EK9 711 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 TEPSINQ96N21 525 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 RANGRFQ9HD47 186 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 SIPA1L3O60292 1781 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 NPIPA2E9PIF3 369 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 NPIPA3F8WFD2 350 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 CACNG3O60359 315 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ZNF91Q05481 1191 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 CPZQ66K79 652 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 AGTRAPQ6RW13 159 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 LRCH3Q96II8 777 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 PIGQQ9BRB3 760 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 DMAC2Q9NW81 257 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ADRA2CP18825 462 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 KDELR2P33947 212 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 NFATC2Q13469 925 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 FOXRED2Q8IWF2 684 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 SLC38A6Q8IZM9 456 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 PCED1BQ96HM7 432 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 NOX3Q9HBY0 568 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ACSS1Q9NUB1 689 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 SLC39A9Q9NUM3 307 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 PCDHA9Q9Y5H5 950 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 C6P13671 934 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 AK4P27144 223 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 MAP2K6P52564 334 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 CATR1Q13166 79 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 SLBPQ14493 270 aaKnown RBP eCLIP7.58□□□□□ -1.2
HTT-201ENST00000355072 PDLIM3Q53GG5 364 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 GPC2Q8N158 579 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ST8SIA4Q92187 359 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 WWTR1Q9GZV5 400 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 KLRF1Q9NZS2 232 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 A0A1W2PPV4 95 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 MTMR11A4FU01 709 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 I6L893 689 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 GLUD1P00367 558 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 RHOP08100 348 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 SUB1P53999 127 aaKnown RBP eCLIP7.58□□□□□ -1.21e-7■■■■□ 20.1
HTT-201ENST00000355072 KCNJ15Q99712 375 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 QTRT2Q9H974 415 aaKnown RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 GPSM3Q9Y4H4 160 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 KNG1P01042 644 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 BCKDHBP21953 392 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 TIGD5Q53EQ6 642 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 RAP1GAP2Q684P5 730 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 SIDT2Q8NBJ9 832 aaKnown RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 WDR18Q9BV38 432 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 KLK14Q9P0G3 267 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 NEMP2A6NFY4 417 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 ZNF705GA8MUZ8 300 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 ALPIP09923 528 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 MAN2A2P49641 1150 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 HMCESQ96FZ2 354 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 TM6SF2Q9BZW4 377 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 MRPS17Q9Y2R5 130 aaKnown RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 ZNF337Q9Y3M9 751 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 RTCAO00442 366 aaKnown RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 SYT5O00445 386 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 TACR3P29371 465 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 CASP3P42574 277 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 KCNQ1P51787 676 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 TMEM115Q12893 351 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 FAHD2BQ6P2I3 314 aaPredicted RBP7.58□□□□□ -1.2
HTT-201ENST00000355072 FAHD2AQ96GK7 314 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 OR8D2Q9GZM6 311 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 BCO1Q9HAY6 547 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 NUMBLQ9Y6R0 609 aa7.58□□□□□ -1.2
HTT-201ENST00000355072 GLAP06280 429 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 CHRNB4P30926 498 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 EMX1Q04741 257 aaPredicted RBP7.57□□□□□ -1.2
HTT-201ENST00000355072 PHYHD1Q5SRE7 291 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 STEAP1BQ6NZ63 245 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 KIR2DS1A0A191URI9 304 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 HPNP05981 417 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 PRDX3P30048 256 aaKnown RBP7.57□□□□□ -1.2
HTT-201ENST00000355072 KIR2DS4P43632 304 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 KIR2DS1Q14954 304 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 CTU2Q2VPK5 515 aaKnown RBP7.57□□□□□ -1.2
HTT-201ENST00000355072 SLC35D3Q5M8T2 416 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 FUT10Q6P4F1 479 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.57□□□□□ -1.2
HTT-201ENST00000355072 IL25Q9H293 177 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 VCX2Q9H322 139 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 TXNL4BQ9NX01 149 aaKnown RBP7.57□□□□□ -1.2
HTT-201ENST00000355072 MPDZO75970 2070 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 MSI1O43347 362 aaKnown RBP7.57□□□□□ -1.2
HTT-201ENST00000355072 GIFP27352 417 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 G0S2P27469 103 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 IRF9Q00978 393 aa7.57□□□□□ -1.2
HTT-201ENST00000355072 ITPRIPL2Q3MIP1 535 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms