RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 OR14L1PQ8NHC6 308 aa20.11■□□□□ 0.81
SHMT1-203ENST00000354098 NPAS1Q99742 590 aa20.11■□□□□ 0.81
SHMT1-203ENST00000354098 OR2B2Q9GZK3 357 aa20.11■□□□□ 0.81
SHMT1-203ENST00000354098 HHATLQ9HCP6 504 aa20.11■□□□□ 0.81
SHMT1-203ENST00000354098 PLSCR2Q9NRY7 297 aa20.11■□□□□ 0.81
SHMT1-203ENST00000354098 EGFL7Q9UHF1 273 aa20.11■□□□□ 0.81
SHMT1-203ENST00000354098 ANKUB1A6NFN9 424 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 SHISA8B8ZZ34 492 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 DNAJA2O60884 412 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 NUDT14O95848 222 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 IGHG3P01860 377 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 GKN3PP0CG01 181 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 NCK1P16333 377 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 PRKAR1BP31321 381 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 KDELR2P33947 212 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 RYKP34925 604 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 DUSP7Q16829 419 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 KRTCAP3Q53RY4 240 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 TRILQ7L0X0 811 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 OR5M1Q8NGP8 315 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 OR5W2Q8NH69 310 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 GPR119Q8TDV5 335 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 FIG4Q92562 907 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 MIB2Q96AX9 1013 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 LDAHQ9H6V9 325 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 TNFRSF10DQ9UBN6 386 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 SLC6A5Q9Y345 797 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 SHANK1Q9Y566 2161 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 A0A1B0GTH9 108 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 CXCR6O00574 342 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 GSTA4O15217 222 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 FRS3O43559 492 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 WISP1O95388 367 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 HSD17B1P14061 328 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 EDN3P14138 238 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 HK1P19367 917 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 DHRS4L2Q6PKH6 230 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 TOR1AIP2Q8NFQ8 470 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 MED17Q9NVC6 651 aa20.1■□□□□ 0.81
SHMT1-203ENST00000354098 MRPS18CQ9Y3D5 142 aaKnown RBP20.1■□□□□ 0.81
SHMT1-203ENST00000354098 TRGV5A0A0B4J1U4 118 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 AP3D1O14617 1153 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 HTR1EP28566 365 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 CBFBQ13951 182 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 GANABQ14697 944 aaKnown RBP20.09■□□□□ 0.81
SHMT1-203ENST00000354098 LRRC23Q53EV4 343 aaPredicted RBP20.09■□□□□ 0.81
SHMT1-203ENST00000354098 FGD2Q7Z6J4 655 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 GRAMD2AQ8IUY3 354 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 CHERPQ8IWX8 916 aaKnown RBP20.09■□□□□ 0.81
SHMT1-203ENST00000354098 GPR32P1Q8NGA4 272 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 SLC26A7Q8TE54 656 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 WFDC6Q9BQY6 131 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 EXO5Q9H790 373 aa20.09■□□□□ 0.81
SHMT1-203ENST00000354098 EXOSC3Q9NQT5 275 aaKnown RBP20.09■□□□□ 0.81
SHMT1-203ENST00000354098 GYG2O15488 501 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 LINGO3P0C6S8 592 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 PRG2P13727 222 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 GGT1P19440 569 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 CD247P20963 164 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 ZNF41P51814 821 aaPredicted RBP20.08■□□□□ 0.81
SHMT1-203ENST00000354098 SUMO3P55854 103 aaPredicted RBP20.08■□□□□ 0.81
SHMT1-203ENST00000354098 B3GALT5-AS1P59052 145 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 HOXC5Q00444 222 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 PLPPR5Q32ZL2 321 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 GFRALQ6UXV0 394 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 GHDCQ8N2G8 530 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 NEIL3Q8TAT5 605 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 CLPTM1LQ96KA5 538 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 BTBD10Q9BSF8 475 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 PINK1Q9BXM7 581 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 SPRR3Q9UBC9 169 aa20.08■□□□□ 0.81
SHMT1-203ENST00000354098 A0A1B0GVC2 190 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 TMEM229AB2RXF0 380 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 SUSD5O60279 629 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 PDE5AO76074 875 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 FREM3P0C091 2139 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 ACAA2P42765 397 aaKnown RBP20.07■□□□□ 0.8
SHMT1-203ENST00000354098 KCNJ5P48544 419 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 ST6GALNAC3Q8NDV1 305 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 OR10Q1Q8NGQ4 319 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 THTPAQ9BU02 230 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 PCDHAC1Q9H158 963 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 ARMC7Q9H6L4 198 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF462Q96JM2 2506 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 CFAP73A6NFT4 308 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 HCN1O60741 890 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 GFRA1P56159 465 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 MRPL49Q13405 166 aaKnown RBP20.07■□□□□ 0.8
SHMT1-203ENST00000354098 QPRTQ15274 297 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 TMEM44Q2T9K0 475 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 RAET1LQ5VY80 246 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 GLYATQ6IB77 296 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 LSRQ86X29 649 aaPredicted RBP20.07■□□□□ 0.8
SHMT1-203ENST00000354098 TNIP2Q8NFZ5 429 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 POC1BQ8TC44 478 aa20.07■□□□□ 0.8
SHMT1-203ENST00000354098 HEATR5AQ86XA9 2040 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF407Q9C0G0 2248 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 A0A087WZY1 265 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 PGCP20142 388 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 EPS8Q12929 822 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms