RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PLXNB2O15031 1838 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 DNAH12Q6ZR08 3092 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PATJQ8NI35 1801 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 GLOD5A6NK44 160 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TSPAN6O43657 245 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF254O75437 659 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ECDO95905 644 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 FOSL1P15407 271 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 HTR1FP30939 366 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 OR12D2P58182 307 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TSPAN31Q12999 210 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 DYRK1AQ13627 763 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 LASP1Q14847 261 aaKnown RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TRAM2Q15035 370 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 LTB4RQ15722 352 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM44Q2T9K0 475 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PGGHGQ32M88 737 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF311Q5JNZ3 666 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PABPC1L2AQ5JQF8 200 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ENTPD8Q5MY95 495 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SLCO4C1Q6ZQN7 724 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TPRG1Q6ZUI0 275 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TMPRSS9Q7Z410 1059 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TPRA1Q86W33 373 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 CCDC36Q8IYA8 594 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 LRRC56Q8IYG6 542 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 CMTM4Q8IZR5 234 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 KCT2Q8NC54 265 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 C17orf47Q8NEP4 570 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 OR2T33Q8NG76 320 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 OR5P2Q8WZ92 322 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 GHSRQ92847 366 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 NEURL3Q96EH8 262 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 RSPO3Q9BXY4 272 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 A4GALTQ9NPC4 353 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 KLHL9Q9P2J3 617 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 MBD2Q9UBB5 411 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 NTNG1Q9Y2I2 539 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 NPTNQ9Y639 398 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 A0A0U1RQF3 1178 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 RAB19A4D1S5 217 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 KPNA3O00505 521 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ABCD4O14678 606 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SURF4O15260 269 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SELENOFO60613 162 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 BMP7P18075 431 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 MAT2AP31153 395 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 RGS8P57771 180 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SMAD3P84022 425 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SERTAD2Q14140 314 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 POM121L1PQ3SYA9 428 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 PRPF38BQ5VTL8 546 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 AADACL4Q5VUY2 407 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF660Q6AZW8 331 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 RAB12Q6IQ22 244 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 GLDNQ6ZMI3 551 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 DNAJB7Q7Z6W7 309 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 LURAP1LQ8IV03 231 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 MCATQ8IVS2 390 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SLC44A3Q8N4M1 653 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SMIM4Q8WVI0 70 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 APOBEC4Q8WW27 367 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 DERL3Q96Q80 235 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ZCCHC2Q9C0B9 1178 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SLC25A18Q9H1K4 315 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ASF1BQ9NVP2 202 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 MED9Q9NWA0 146 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 AHSPQ9NZD4 102 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SH2B3Q9UQQ2 575 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 CARNS1A5YM72 827 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 NARSO43776 548 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 OAZ2O95190 189 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 GYPBP06028 91 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 C1GALT1C1LP0DN25 315 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SYN1P17600 705 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 NOS3P29474 1203 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 PDHA2P29803 388 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 DCTDP32321 178 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ART1P52961 327 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 UBE2IP63279 158 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 BLOC1S1P78537 153 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 COL9A2Q14055 689 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 TP53I3Q53FA7 332 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 CHST9Q7L1S5 443 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 CPXM2Q8N436 756 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 CYB561A3Q8NBI2 242 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF485Q8NCK3 441 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 MORN4Q8NDC4 146 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 OR52L1Q8NGH7 329 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM169Q96HH4 297 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 AHCYL2Q96HN2 611 aaKnown RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 F2RL3Q96RI0 385 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 BBS4Q96RK4 519 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 MAN2C1Q9NTJ4 1040 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 EMC3Q9P0I2 261 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 PLXNA4Q9HCM2 1894 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ANTXRLA6NF34 631 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms