RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 KIR2DS5Q14953 304 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 KCNJ8Q15842 424 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TMEM91Q6ZNR0 172 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TMPRSS11FQ6ZWK6 438 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 VWA5B2Q8N398 1253 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 LNX2Q8N448 690 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 AVL9Q8NBF6 648 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 SMRP1Q8NCR6 262 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TOE1Q96GM8 510 aaKnown RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TBX5Q99593 518 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 CCDC3Q9BQI4 270 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 JAM3Q9BX67 310 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 KRCC1Q9NPI7 259 aaPredicted RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 DTX4Q9Y2E6 619 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 SYNDIG1LA6NDD5 238 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 FABP12A6NFH5 140 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 CD8B2A6NJW9 211 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 C12orf71A8MTZ7 269 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 AKAP8O43823 692 aaKnown RBP14.28□□□□□ -0.12
UPF3B-202ENST00000345865 FMO6PO60774 539 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 SLC35E2P0CK97 266 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 THEGLP0DJG4 465 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 CD8BP10966 210 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 FOXK2Q01167 660 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 DDI2Q5TDH0 399 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 GARNL3Q5VVW2 1013 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 MEPCEQ7L2J0 689 aaKnown RBP14.28□□□□□ -0.12
UPF3B-202ENST00000345865 MARCH9Q86YJ5 346 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 SETD6Q8TBK2 473 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 DNAJA4Q8WW22 397 aaPredicted RBP14.28□□□□□ -0.12
UPF3B-202ENST00000345865 ART5Q96L15 291 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 FAM210AQ96ND0 272 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 C8orf33Q9H7E9 229 aaPredicted RBP14.28□□□□□ -0.12
UPF3B-202ENST00000345865 PCDHGB2Q9Y5G2 931 aa14.28□□□□□ -0.12
UPF3B-202ENST00000345865 A0A0A6YYC8 382 aaPredicted RBP14.27□□□□□ -0.12
UPF3B-202ENST00000345865 C2CD4DB7Z1M9 353 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 I3L1I5 382 aaPredicted RBP14.27□□□□□ -0.12
UPF3B-202ENST00000345865 CASKO14936 926 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 HYAL3O43820 417 aaPredicted RBP14.27□□□□□ -0.12
UPF3B-202ENST00000345865 CLUP10909 449 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 NOS3P29474 1203 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 NKX2-5P52952 324 aaPredicted RBP14.27□□□□□ -0.12
UPF3B-202ENST00000345865 COPZ1P61923 177 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 GPR50Q13585 617 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 AMZ1Q400G9 498 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 PRPF38BQ5VTL8 546 aaKnown RBP14.27□□□□□ -0.12
UPF3B-202ENST00000345865 ZNF614Q8N883 585 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 OR52L1Q8NGH7 329 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 OR51A7Q8NH64 312 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 CHAC2Q8WUX2 184 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 ITFG2Q969R8 447 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 COMMD3Q9UBI1 195 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 FBXL4Q9UKA2 621 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 POMT2Q9UKY4 750 aa14.27□□□□□ -0.12
UPF3B-202ENST00000345865 A0A0B4J2E0 115 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 A0A1B0GX12 115 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 PTP4A3O75365 173 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 REM1O75628 298 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 CDC123O75794 336 aaPredicted RBP14.27□□□□□ -0.13
UPF3B-202ENST00000345865 BMP7P18075 431 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 ACAA2P42765 397 aaKnown RBP14.27□□□□□ -0.13
UPF3B-202ENST00000345865 FHL1Q13642 323 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 FAM53BQ14153 422 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 ERV3-1Q14264 604 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 ARMC4Q5T2S8 1044 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 AGAP6Q5VW22 663 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 KIAA0895LQ68EN5 471 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 XKRXQ6PP77 449 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 OOSP2Q86WS3 158 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 SLC37A3Q8NCC5 494 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 ATP6V1C2Q8NEY4 427 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 NEIL3Q8TAT5 605 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 SMAP2Q8WU79 429 aaPredicted RBP14.27□□□□□ -0.13
UPF3B-202ENST00000345865 SENP5Q96HI0 755 aaPredicted RBP14.27□□□□□ -0.13
UPF3B-202ENST00000345865 AGAP4Q96P64 663 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 ATF6BQ99941 703 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 IFT27Q9BW83 186 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 SEMA6CQ9H3T2 930 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 FN3KQ9H479 309 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 CMC2Q9NRP2 79 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 GPR27Q9NS67 375 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 HCN3Q9P1Z3 774 aa14.27□□□□□ -0.13
UPF3B-202ENST00000345865 A0A1B0GWA3 101 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 CCDC182A6NF36 153 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 OR5K4A6NMS3 321 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 B4DGG1 531 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 POLR1CO15160 346 aaPredicted RBP14.26□□□□□ -0.13
UPF3B-202ENST00000345865 DYRK3O43781 588 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 OR10H2O60403 315 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 AK1P00568 194 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 HLA-DPB1P04440 258 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 SAGP10523 405 aaPredicted RBP14.26□□□□□ -0.13
UPF3B-202ENST00000345865 OR2B6P58173 313 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 KLHL12Q53G59 568 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 NCCRP1Q6ZVX7 275 aaPredicted RBP14.26□□□□□ -0.13
UPF3B-202ENST00000345865 NR2C2APQ86WQ0 139 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 GID4Q8IVV7 300 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 ACBD7Q8N6N7 88 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 ALG8Q9BVK2 526 aa14.26□□□□□ -0.13
UPF3B-202ENST00000345865 GPR174Q9BXC1 333 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms