RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 TGFBR3LH3BV60 316 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ARHGEF9O43307 516 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ANKRD34CP0C6C1 535 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 S1PR1P21453 382 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 CBLP22681 906 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 PTBP1P26599 531 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLK3-201ENST00000345005 HLA-DMAP28067 261 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 PRKAR1BP31321 381 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 MAP3K8P41279 467 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 GCGRP47871 477 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 BTG2P78543 158 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ILKQ13418 452 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ERV3-1Q14264 604 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 CARTPTQ16568 116 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 SLC23A3Q6PIS1 610 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 DEF8Q6ZN54 512 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 FRRS1Q6ZNA5 592 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 EID2Q8N6I1 236 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 COX18Q8N8Q8 333 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 OR52P1PQ8NH57 321 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 DOK4Q8TEW6 326 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ST6GAL2Q96JF0 529 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 OR1F2PQ96R84 312 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 NMNAT1Q9HAN9 279 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 C12orf10Q9HB07 376 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 AMBNQ9NP70 447 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 FGF21Q9NSA1 209 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 KLHL28Q9NXS3 571 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ACAD8Q9UKU7 415 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 TBC1D24Q9ULP9 559 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 MMACHCQ9Y4U1 282 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ASCC3Q8N3C0 2202 aaKnown RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 MEIOCA2RUB1 952 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 CTDSP2O14595 271 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 FFAR1O14842 300 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 PCDH17O14917 1159 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 RGS5O15539 181 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 FCMRO60667 390 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 STX11O75558 287 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 CDC123O75794 336 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 CBX7O95931 251 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 NKX2-5P52952 324 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 NUDT6P53370 316 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 CCL7P80098 99 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 MLLT11Q13015 90 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 LARS2Q15031 903 aaKnown RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 SPHARQ15513 63 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ZNHIT3Q15649 155 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 TRIM61Q5EBN2 209 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ZNF574Q6ZN55 896 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 DGAT2L6Q6ZPD8 337 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 NRARPQ7Z6K4 114 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 LINC00471Q8N535 108 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 OR4D9Q8NGE8 314 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 OR4D11Q8NGI4 311 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 GPR151Q8TDV0 419 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 NR4A3Q92570 626 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 HOXB13Q92826 284 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ZNF501Q96CX3 271 aaPredicted RBP11.88□□□□□ -0.51
CLK3-201ENST00000345005 NIPSNAP1Q9BPW8 284 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 KCNS3Q9BQ31 491 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 MED18Q9BUE0 208 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 LRRN3Q9H3W5 708 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 ISYNA1Q9NPH2 558 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 FTSJ1Q9UET6 329 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
CLK3-201ENST00000345005 LOC105371267A0A1B0GV96 52 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 SNTNA6NMZ2 147 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 PATE3B3GLJ2 98 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 GPX5O75715 221 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 NKX2-2O95096 273 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 CRYZL1O95825 349 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 OSMP13725 252 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 ERP29P30040 261 aaKnown RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 GABRA3P34903 492 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 DUSP3P51452 185 aaPredicted RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 RAB25P57735 213 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 PSPHP78330 225 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 POU6F2P78424 691 aaPredicted RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 ACY1Q03154 408 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 ZNF155Q12901 538 aaPredicted RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 DUSP8Q13202 625 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 OCLNQ16625 522 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 DCST1Q5T197 706 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 DCST2Q5T1A1 773 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 FAAH2Q6GMR7 532 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 TYW3Q6IPR3 259 aaKnown RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 METAP1DQ6UB28 335 aaPredicted RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 NOXA1Q86UR1 476 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 RBM45Q8IUH3 476 aaKnown RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 ZBTB44Q8NCP5 570 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 PSD4Q8NDX1 1056 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 ZG16BQ96DA0 208 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms