RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 OR2T7P0C7T2 308 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RAG2P55895 527 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RPS25P62851 125 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TOMM20Q15388 145 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ANKRD53Q8N9V6 530 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OR2T27Q8NH04 317 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GPR148Q8TDV2 347 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PAQR8Q8TEZ7 354 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 UCN3Q969E3 161 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CLCC1Q96S66 551 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PGAP2Q9UHJ9 254 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 D6RAR5 112 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LGI1O95970 557 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 AMY2AP04746 511 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ACP5P13686 325 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SPNP16150 400 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NAA10P41227 235 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SOX2P48431 317 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CLLU1Q5K131 121 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 AFMIDQ63HM1 303 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ALG1LQ6GMV1 187 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TCEAL6Q6IPX3 200 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 IFNL1Q8IU54 200 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GLB1L2Q8IW92 636 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RNF175Q8N4F7 328 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RASGEF1AQ8N9B8 481 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OR5D14Q8NGL3 314 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OR4C15Q8NGM1 316 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZBTB8AQ96BR9 441 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 EGLN3Q9H6Z9 239 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZFP57Q9NU63 452 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 FAM183AA6NL82 134 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NPIPA5E9PKD4 350 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NARSO43776 548 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CSTAP01040 98 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 HLA-AP01891 365 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 HMGN2P05204 90 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 INHBBP09529 407 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZP3P21754 424 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RBMXP38159 391 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PFN3P60673 137 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 KLHDC8BQ8IXV7 354 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 C7orf34Q96L11 122 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZIC5Q96T25 663 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SRRQ9GZT4 340 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CCDC86Q9H6F5 360 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ACOXLQ9NUZ1 547 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NPIPA1Q9UND3 350 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RCE1Q9Y256 329 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NPFFR2Q9Y5X5 522 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 DNMT3AQ9Y6K1 912 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PATJQ8NI35 1801 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 H7C417 338 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GABRA3P34903 492 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TAS2R31P59538 309 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PRKCZQ05513 592 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LTBQ06643 244 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SLC18B1Q6NT16 456 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TTC9Q92623 222 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SCAMP4Q969E2 229 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PMEPA1Q969W9 287 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 S100PBPQ96BU1 408 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 IL20RAQ9UHF4 553 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PRSS21Q9Y6M0 314 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ANK1P16157 1881 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 M0R082 166 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TP53P04637 393 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ITGA5P08648 1049 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PRKAR1BP31321 381 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 FAM180BQ6P0A1 224 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 FCRLAQ7L513 359 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 IRF7Q92985 503 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SERINC2Q96SA4 455 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SULT4A1Q9BR01 284 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ERVMER34-1Q9H9K5 563 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LIN7BQ9HAP6 207 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RPS10P5Q9NQ39 176 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 POM121CA8CG34 1229 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GPRIN2O60269 458 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CD53P19397 219 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TACR1P25103 407 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PTPN6P29350 595 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SPRYD7Q5W111 196 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SORCS2Q96PQ0 1159 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NRIP3Q9NQ35 241 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LHX3Q9UBR4 397 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PLXNB2O15031 1838 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TRAV18A0A075B6X5 111 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SLCO2B1O94956 709 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TFPIP10646 304 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 KIR2DL3P43628 341 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 VEGFCP49767 419 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 VSX2P58304 361 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GALK2Q01415 458 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 DEFA6Q01524 100 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PUS10Q3MIT2 529 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 VITQ6UXI7 678 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CALHM3Q86XJ0 350 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms