RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC25A21Q9BQT8 299 aaPredicted RBP5.84□□□□□ -1.47
VCAN-203ENST00000343200 SLC25A51Q9H1U9 297 aa5.84□□□□□ -1.47
VCAN-203ENST00000343200 ZFP92A6NM28 416 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 KCNK5O95279 499 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 NTF3P20783 257 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 NMBRP28336 390 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 DAOAP59103 153 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 PPP1CBP62140 327 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 CRHR2Q13324 411 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 FAM214AQ32MH5 1076 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 ZNF691Q5VV52 312 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 HBMQ6B0K9 141 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 EXD3Q8N9H8 876 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 GATA6Q92908 595 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 EDEM2Q9BV94 578 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 TEX264Q9Y6I9 313 aa5.84□□□□□ -1.48
VCAN-203ENST00000343200 CASTOR2A6NHX0 329 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ALPLP05186 524 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 MMP3P08254 477 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CKMT1AP12532 417 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 RPL17P18621 184 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 PSMD8P48556 350 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HMGCS2P54868 508 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HTR4Q13639 388 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 APOFQ13790 326 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PAGE3Q5JUK9 113 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TECPR1Q7Z6L1 1165 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF573Q86YE8 665 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR4D10Q8NGI6 311 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR14L1PQ8NHC6 308 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SPRYD4Q8WW59 207 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 INTS12Q96CB8 462 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 PHYHIPLQ96FC7 376 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 WFIKKN1Q96NZ8 548 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SLC38A3Q99624 504 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PIGQQ9BRB3 760 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ARV1Q9H2C2 271 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZDHHC4Q9NPG8 344 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 GPR173Q9NS66 373 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF281Q9Y2X9 895 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 RIF1Q5UIP0 2472 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF462Q96JM2 2506 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 H3BQ06 376 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 GABRDO14764 452 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TAAR5O14804 337 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF264O43296 627 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 DNPH1O43598 174 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 FZD7O75084 574 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 GGT1P19440 569 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HTR1EP28566 365 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HOXD11P31277 338 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 PIGFQ07326 219 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 MN1Q10571 1320 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 IL20RBQ6UXL0 311 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF836Q6ZNA1 936 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZFPM1Q8IX07 1006 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR10G6Q8NH81 332 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SDCBP2Q9H190 292 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 UCK1Q9HA47 277 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PIGVQ9NUD9 493 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CNTNAP4Q9C0A0 1308 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 DCTN6O00399 190 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 UBL3O95164 117 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 STAG3L3P0CL85 134 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF25P17030 456 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 IL1R2P27930 398 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ACTR1BP42025 376 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SEC61A1P61619 476 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 VASH1Q7L8A9 365 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 SLC51AQ86UW1 340 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR4N2Q8NGD1 307 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR51T1Q8NGJ9 327 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR5AK3PQ8NH89 298 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF417Q8TAU3 575 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 DUSP19Q8WTR2 217 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HMGB4Q8WW32 186 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF382Q96SR6 550 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CERS4Q9HA82 394 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 M0R1X1 148 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ACKR2O00590 384 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR4F21O95013 312 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SLC25A27O95847 323 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 GIPP09681 153 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 DIO1P49895 249 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CLDN6P56747 220 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SELENOVP59797 346 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 UFM1P61960 85 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CDK5R2Q13319 367 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 BEX5Q5H9J7 111 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 GGNBP1Q5YKI7 109 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CHADLQ6NUI6 762 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 DHRS4L2Q6PKH6 230 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 LAX1Q8IWV1 398 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 GPC2Q8N158 579 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CARFQ8N187 725 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PXYLP1Q8TE99 480 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SFT2D1Q8WV19 159 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 FAM103A1Q9BTL3 118 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 DUS2Q9NX74 493 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms