RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 GPR22Q99680 433 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 E9PCH4 1651 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CBX7O95931 251 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 SLC24A4Q8NFF2 622 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 TTYH3Q9C0H2 523 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 TM7SF3Q9NS93 570 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 FER1L4A9Z1Z3 1794 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 KDM6BO15054 1643 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 GLOD5A6NK44 160 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 F5H5K5 113 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CNIH1O95406 144 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 GCSHP23434 173 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 STT3AP46977 705 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 PRRT3Q5FWE3 981 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 TMEM104Q8NE00 496 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 OR52H1Q8NGJ2 320 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 SYNPO2LQ9H987 977 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 LIN7BQ9HAP6 207 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 OR2C1O95371 312 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 ELK1P19419 428 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 GGT1P19440 569 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 LRRC73Q5JTD7 316 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 MKXQ8IYA7 352 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 STT3BQ8TCJ2 826 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 KLHDC7BQ96G42 594 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 ANKRD19PQ9H560 264 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 WASH6PQ9NQA3 447 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMAD4-201ENST00000342988 EIF3FO00303 357 aaPredicted RBP16.68■□□□□ 0.26
SMAD4-201ENST00000342988 MPIG6BO95866 241 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CNIH2Q6PI25 160 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 RAB18Q9NP72 206 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 LRRC10BA6NIK2 292 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 ITM2AO43736 263 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 RGS11O94810 467 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 ORM1P02763 201 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 GABRA2P47869 451 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CLDN6P56747 220 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 RNF141Q8WVD5 230 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 MUCL1Q96DR8 90 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CHRDQ9H2X0 955 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 NTSR2O95665 410 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 G6PDP11413 515 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 TYRP14679 529 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 AADACL3Q5VUY0 350 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 SFRP4Q6FHJ7 346 aaPredicted RBP16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CCDC116Q8IYX3 515 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 PCED1AQ9H1Q7 454 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 KCNMB3Q9NPA1 279 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 BABAM2Q9NXR7 383 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 B4GALT6Q9UBX8 382 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 C1orf226A1L170 272 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 RBMS2Q15434 407 aaKnown RBP16.68■□□□□ 0.26
SMAD4-201ENST00000342988 NSDHLQ15738 373 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 STEAP1BQ6NZ63 245 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 OR13J1Q8NGT2 312 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CPNE4Q96A23 557 aaPredicted RBP16.68■□□□□ 0.26
SMAD4-201ENST00000342988 INTS14Q96SY0 518 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 RHBDD3Q9Y3P4 386 aa16.68■□□□□ 0.26
SMAD4-201ENST00000342988 CACNA1DQ01668 2161 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 KCNJ8Q15842 424 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 SYT6Q5T7P8 510 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CES4AQ5XG92 561 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 TMPRSS11FQ6ZWK6 438 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CLEC1AQ8NC01 280 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 LRRN4CLQ8ND94 238 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 OR4F6Q8NGB9 312 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CNR1P21554 472 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 GPR4P46093 362 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 NOGQ13253 232 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 IQCKQ8N0W5 287 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 BARX1Q9HBU1 254 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 HRASLS2Q9NWW9 162 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 ANKRD66B4E2M5 251 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 TGOLN2O43493 480 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 SLC35F2Q8IXU6 374 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 RNF175Q8N4F7 328 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 BPIFCQ8NFQ6 507 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CDCA5Q96FF9 252 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 FCRL5Q96RD9 977 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CFAP20Q9Y6A4 193 aaKnown RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 MEIS3P2A8K0S8 358 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 RAB40ALP0C0E4 278 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 HNRNPA3P51991 378 aaKnown RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 PROX2Q3B8N5 592 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 OR5D16Q8NGK9 328 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 RAB40AQ8WXH6 277 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CCNL2Q96S94 520 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 RHCGQ9UBD6 479 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 CDC123O75794 336 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 DRD2P14416 443 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 METAP1DQ6UB28 335 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 ZNF582Q96NG8 517 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 FCRL3Q96P31 734 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 OR5B2Q96R09 309 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 OSGIN2Q9Y236 505 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms