RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MED20Q9H944 212 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MED17Q9NVC6 651 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 RBFOX1Q9NWB1 397 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 CPNE7Q9UBL6 633 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 EPHA6Q9UF33 1036 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MGAT4AQ9UM21 535 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 DHDHQ9UQ10 334 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PLEKHM1Q9Y4G2 1056 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CROCCQ5TZA2 2017 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 C13orf42A0A1B0GVH6 325 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SLC9B1P1A6NJY1 282 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CFIP05156 583 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 S100A9P06702 114 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 NR2C1P13056 603 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 HOXA9P31269 272 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CBX5P45973 191 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 RABIFP47224 123 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PRPS1P60891 318 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 OC90Q02509 493 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 NFATC4Q14934 902 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TMEM31Q5JXX7 168 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CCSAPQ6IQ19 270 aaPredicted RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 SERPINA12Q8IW75 414 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MCEMP1Q8IX19 187 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 DNAJC5GQ8N7S2 189 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 NT5DC2Q9H857 520 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PLCL2Q9UPR0 1127 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 COL24A1Q17RW2 1714 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 AHCTF1Q8WYP5 2266 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CSO75390 466 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 RLN2P04090 185 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 H2BFMP0C1H6 154 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 RORAP35398 523 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TRIM23P36406 574 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SLC19A1P41440 591 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CHAF1BQ13112 559 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CRMP1Q14194 572 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 FAM189A2Q15884 450 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 OCLNQ16625 522 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MFSD12Q6NUT3 480 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZNF767PQ75MW2 155 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SLC35F2Q8IXU6 374 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZDHHC1Q8WTX9 485 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 HOXD1Q9GZZ0 328 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ATG5Q9H1Y0 275 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PTGES2Q9H7Z7 377 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SIAEQ9HAT2 523 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 MBNL1Q9NR56 388 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 CCDC85CA6NKD9 419 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 WRBO00258 174 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TPD52L2O43399 206 aaKnown RBP6.72□□□□□ -1.33
VCAN-202ENST00000342785 HCKP08631 526 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ITGA5P08648 1049 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CD22P20273 847 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PRPH2P23942 346 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TEAD1P28347 426 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PRKXP51817 358 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SERTAD2Q14140 314 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 LRRC37A5PQ49AS3 106 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TMEM225Q6GV28 225 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ACSM5Q6NUN0 579 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 PAQR6Q6TCH4 344 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 IL20RBQ6UXL0 311 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 KCTD9Q7L273 389 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TMPRSS9Q7Z410 1059 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 FAM26EQ8N5C1 309 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 OR5AK2Q8NH90 309 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ADAMTS18Q8TE60 1221 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 C17orf50Q8WW18 174 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SNX18Q96RF0 628 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 TNFRSF13CQ96RJ3 184 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 HDAC8Q9BY41 377 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.72□□□□□ -1.33
VCAN-202ENST00000342785 SLC25A18Q9H1K4 315 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 SPNS1Q9H2V7 528 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 KLHL21Q9UJP4 597 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 BOLA1Q9Y3E2 137 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 CACNG2Q9Y698 323 aa6.72□□□□□ -1.33
VCAN-202ENST00000342785 ZAR1LA6NP61 321 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 FPR3P25089 353 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 FNTBP49356 437 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 EIF5AP63241 154 aaKnown RBP6.71□□□□□ -1.33
VCAN-202ENST00000342785 DEFA5Q01523 94 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 MAPK14Q16539 360 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 CTF1Q16619 201 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 LRRC28Q86X40 367 aaPredicted RBP6.71□□□□□ -1.33
VCAN-202ENST00000342785 PHOSPHO2Q8TCD6 241 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 LINC01553A4QN01 128 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 LRIT2A6NDA9 550 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 HMGN4O00479 90 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 SOCS6O14544 535 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 FCMRO60667 390 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 TIAL1Q01085 375 aaKnown RBP eCLIP6.71□□□□□ -1.33
VCAN-202ENST00000342785 DPTQ07507 201 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 SCRN3Q0VDG4 424 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 FAM205BPQ63HN1 556 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 XAF1Q6GPH4 301 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 DHRS4L2Q6PKH6 230 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 NKAIN4Q8IVV8 208 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms