RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ELP5Q8TE02 316 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 ARSGQ96EG1 525 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 TRIM2Q9C040 744 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 ANKRD19PQ9H560 264 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 KRCC1Q9NPI7 259 aaPredicted RBP15.92■□□□□ 0.14
CLDN4-201ENST00000340958 MAN2C1Q9NTJ4 1040 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 ENOPH1Q9UHY7 261 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 LAMA5O15230 3695 aa15.92■□□□□ 0.14
CLDN4-201ENST00000340958 LOC100130705A0A1B0GUX0 176 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ZNF264O43296 627 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 LINGO3P0C6S8 592 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ICAM2P13598 275 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 FBXW4P57775 412 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ADARB1P78563 741 aaKnown RBP15.91■□□□□ 0.14
CLDN4-201ENST00000340958 MARCH3Q86UD3 253 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 SLC35B4Q969S0 331 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 IMMP1LQ96LU5 166 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 PSD2Q9BQI7 771 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 MMP25Q9NPA2 562 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 CARD8Q9Y2G2 431 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 EIF4E1BA6NMX2 242 aaKnown RBP15.91■□□□□ 0.14
CLDN4-201ENST00000340958 BCKDKO14874 412 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 SCO2O43819 266 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 GMFGO60234 142 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ADAP00813 363 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 CELA2AP08217 269 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ENDOUP21128 410 aaKnown RBP15.91■□□□□ 0.14
CLDN4-201ENST00000340958 MYF6P23409 242 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 CD82P27701 267 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 EVI2BP34910 448 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 POLR2IP36954 125 aaKnown RBP15.91■□□□□ 0.14
CLDN4-201ENST00000340958 CHN2P52757 468 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 NPRL3Q12980 569 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 CD226Q15762 336 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ZNF613Q6PF04 617 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 NKAIN4Q8IVV8 208 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 C8orf59Q8N0T1 100 aaPredicted RBP15.91■□□□□ 0.14
CLDN4-201ENST00000340958 TOR1AIP2Q8NFQ8 470 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 PIGXQ8TBF5 258 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 SH3YL1Q96HL8 342 aaPredicted RBP15.91■□□□□ 0.14
CLDN4-201ENST00000340958 UCK2Q9BZX2 261 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ING2Q9H160 280 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 UBAP1Q9NZ09 502 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 FBXL4Q9UKA2 621 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 ZFHX4Q86UP3 3567 aa15.91■□□□□ 0.14
CLDN4-201ENST00000340958 LOC101059948A0A1B0GTJ6 334 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 HCRTR2O43614 444 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ITGAMP11215 1152 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 CBLP22681 906 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ITPKBP27987 946 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ADH7P40394 386 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ALDH6A1Q02252 535 aaKnown RBP15.9■□□□□ 0.14
CLDN4-201ENST00000340958 PGBD2Q6P3X8 592 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ISLR2Q6UXK2 745 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 RAB43Q86YS6 212 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 APLFQ8IW19 511 aaPredicted RBP15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ZNF563Q8TA94 476 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 ACOT11Q8WXI4 607 aaPredicted RBP15.9■□□□□ 0.14
CLDN4-201ENST00000340958 KIAA1143Q96AT1 154 aaPredicted RBP15.9■□□□□ 0.14
CLDN4-201ENST00000340958 MUS81Q96NY9 551 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 GMPPBQ9Y5P6 360 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 APC2O95996 2303 aa15.9■□□□□ 0.14
CLDN4-201ENST00000340958 A0A087WUU8 490 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 MAGEA13PA6NCF6 341 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 TMEM200CA6NKL6 621 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 NUDT14O95848 222 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 NAGAP17050 411 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 F8A1P23610 371 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 POU1F1P28069 291 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ACAA2P42765 397 aaKnown RBP15.89■□□□□ 0.13
CLDN4-201ENST00000340958 PLAURQ03405 335 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ZNF770Q6IQ21 691 aaPredicted RBP15.89■□□□□ 0.13
CLDN4-201ENST00000340958 TTC33Q6PID6 262 aaPredicted RBP15.89■□□□□ 0.13
CLDN4-201ENST00000340958 APOOLQ6UXV4 268 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 TMEM255BQ8WV15 326 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 NACC2Q96BF6 587 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 NXPE2Q96DL1 559 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 APOL4Q9BPW4 351 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 PNPLA3Q9NST1 481 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 P4HTMQ9NXG6 502 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ACACAQ13085 2346 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 A0A1B0GWA3 101 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 A0A1W2PQD3 144 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ALG1L2C9J202 215 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 H3BN98 237 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ZZEF1O43149 2961 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ITGA10O75578 1167 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ANGPTL1O95841 491 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 HPP00738 406 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 NGFRP08138 427 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 PTNP21246 168 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 ALG10BQ5I7T1 473 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 NUP54Q7Z3B4 507 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 SLC15A4Q8N697 577 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 POGLUT1Q8NBL1 392 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 RASL10BQ96S79 203 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 FUZQ9BT04 418 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 GRIP2Q9C0E4 1043 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 GPN2Q9H9Y4 310 aaPredicted RBP15.89■□□□□ 0.13
CLDN4-201ENST00000340958 KLRF1Q9NZS2 232 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms