RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 BCKDKO14874 412 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 PGM3O95394 542 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 NUDT14O95848 222 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 MSX1P28360 303 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 AQP1P29972 269 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 PGM1P36871 562 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 CPA2P48052 419 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 STARP49675 285 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 GFRA1P56159 465 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 KCNJ10P78508 379 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 CDK6Q00534 326 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 SCARB2Q14108 478 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 GNA13Q14344 377 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 TOMM34Q15785 309 aaPredicted RBP12.87□□□□□ -0.35
CTSL-201ENST00000340342 PLPPR5Q32ZL2 321 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 XKRXQ6PP77 449 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 NCCRP1Q6ZVX7 275 aaPredicted RBP12.87□□□□□ -0.35
CTSL-201ENST00000340342 VRK2Q86Y07 508 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 PEX5LQ8IYB4 626 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 OR52P1PQ8NH57 321 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 CNOT9Q92600 299 aaKnown RBP12.87□□□□□ -0.35
CTSL-201ENST00000340342 ABTB1Q969K4 478 aaPredicted RBP12.87□□□□□ -0.35
CTSL-201ENST00000340342 SARAFQ96BY9 339 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 NSL1Q96IY1 281 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 SFXN2Q96NB2 322 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 TIMP4Q99727 224 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 MED17Q9NVC6 651 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 RLIMQ9NVW2 624 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 GID8Q9NWU2 228 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 USP22Q9UPT9 525 aa12.87□□□□□ -0.35
CTSL-201ENST00000340342 MRPS18CQ9Y3D5 142 aaKnown RBP12.87□□□□□ -0.35
CTSL-201ENST00000340342 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 A0A0G2JPF8 293 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 HNRNPCL2B2RXH8 293 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 HNRNPCL3B7ZW38 293 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 NPPAP01160 153 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 DBIP07108 87 aaKnown RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 HNRNPCL4P0DMR1 293 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 NID1P14543 1247 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 IL7RP16871 459 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 AGAP20933 346 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 SLC6A2P23975 617 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 PRDX6P30041 224 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ADH7P40394 386 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 NUDT2P50583 147 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 GZMMP51124 257 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 P2RX1P51575 399 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ZNF41P51814 821 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 SMSP52788 366 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 BNIP1Q12981 228 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 NHSL2Q5HYW2 709 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 MRPL2Q5T653 305 aaKnown RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 VASNQ6EMK4 673 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ZNF836Q6ZNA1 936 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 YTHDF3Q7Z739 585 aaKnown RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 ZZZ3Q8IYH5 903 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ZNF808Q8N4W9 903 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 FAM71CQ8NEG0 241 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 OR8J3Q8NGG0 315 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 PHF10Q8WUB8 498 aaKnown RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 DTNBP1Q96EV8 351 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 RSPO3Q9BXY4 272 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 LAT2Q9GZY6 243 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 TP63Q9H3D4 680 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 HHATLQ9HCP6 504 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 BCL2L10Q9HD36 194 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 ARL8BQ9NVJ2 186 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 ZNF443Q9Y2A4 671 aaPredicted RBP12.86□□□□□ -0.35
CTSL-201ENST00000340342 SLC35A3Q9Y2D2 325 aa12.86□□□□□ -0.35
CTSL-201ENST00000340342 MPDZO75970 2070 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 DOCK7Q96N67 2140 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 A1L4Q6 167 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 OR2M5A3KFT3 312 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 EIF4E2O60573 245 aaKnown RBP12.85□□□□□ -0.35
CTSL-201ENST00000340342 ADAM11O75078 769 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 ATP5HO75947 161 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 CLDN1O95832 211 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 LINGO3P0C6S8 592 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 TMEM44Q2T9K0 475 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 WLSQ5T9L3 541 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 TMEM211Q6ICI0 200 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 AAGABQ6PD74 315 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 NET1Q7Z628 596 aaPredicted RBP12.85□□□□□ -0.35
CTSL-201ENST00000340342 MRGPRGQ86SM5 289 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
CTSL-201ENST00000340342 C11orf65Q8NCR3 313 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms