RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 CTSBP07858 339 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 VSX2P58304 361 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 FOXK2Q01167 660 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 ZNF544Q6NX49 715 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 B3GLCTQ6Y288 498 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 ZNF438Q7Z4V0 828 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 MARCH9Q86YJ5 346 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 TMEM99Q8N816 258 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 ATP6V1C2Q8NEY4 427 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 OR52L1Q8NGH7 329 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 CTRCQ99895 268 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 GSDMCQ9BYG8 508 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 FAM60AQ9NP50 221 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 TMEM5Q9Y2B1 443 aa13.34□□□□□ -0.27
ARHGEF1-201ENST00000337665 PRAMEF26H0Y7S4 382 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 CASKO14936 926 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 PLA2G10O15496 165 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 RNF13O43567 381 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 ADAM11O75078 769 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 RCBTB2O95199 551 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 IL9P15248 144 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 RIN1Q13671 783 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 ZNF517Q6ZMY9 492 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 CAMKK1Q8N5S9 505 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 ACBD7Q8N6N7 88 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 OR52R1Q8NGF1 315 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 OR13C2Q8NGS9 318 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 C8orf33Q9H7E9 229 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 OR5K3A6NET4 321 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 OR5K4A6NMS3 321 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 C12orf71A8MTZ7 269 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 LTBRP36941 435 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 ACAA2P42765 397 aaKnown RBP13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 PSG6Q00889 435 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 GALEQ14376 348 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 RAB30Q15771 203 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 BCL2A1Q16548 175 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 METAP1DQ6UB28 335 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 RDH10Q8IZV5 341 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 SLC37A3Q8NCC5 494 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 CNOT9Q92600 299 aaKnown RBP13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 BABAM2Q9NXR7 383 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 MMP17Q9ULZ9 603 aa13.33□□□□□ -0.28
ARHGEF1-201ENST00000337665 DVL2O14641 736 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 NCR1O76036 304 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 IGKV1D-16P01601 117 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 IGLV3-19P01714 112 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 PTBP1P26599 531 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■■■□ 26.4
ARHGEF1-201ENST00000337665 RAB43Q86YS6 212 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 ALG8Q9BVK2 526 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 SLC22A4Q9H015 551 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 C11orf54Q9H0W9 315 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 SEMA6CQ9H3T2 930 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 INPP5EQ9NRR6 644 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CD207Q9UJ71 328 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CD8B2A6NJW9 211 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 GTPBP1O00178 669 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CHP2O43745 196 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 HPGDSO60760 199 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 TMCC2O75069 709 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 RDH16O75452 317 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CCNKO75909 580 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CD8BP10966 210 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 RPS5P46782 204 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 EVX1P49640 407 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 EMDP50402 254 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 FZD2Q14332 565 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 TAB1Q15750 504 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 FRMD1Q8N878 549 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 SCAIQ8N9R8 606 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 AHCYL2Q96HN2 611 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 TEAD3Q99594 435 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 DNAJB12Q9NXW2 375 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 POMT2Q9UKY4 750 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 SPTY2D1-AS1A0A0U1RR47 76 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 HTR3EA5X5Y0 456 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 TGFBR3LH3BV60 316 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 FOXS1O43638 330 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 SOX30O94993 753 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 NGFRP08138 427 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 BMP7P18075 431 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 BMP8BP34820 402 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 ATP6V1E1P36543 226 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CCR5P51681 352 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CCINQ13939 588 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 PDZK1Q5T2W1 519 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 CNIH2Q6PI25 160 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 BMP8AQ7Z5Y6 402 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 NR2C2APQ86WQ0 139 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
ARHGEF1-201ENST00000337665 COMMD3Q9UBI1 195 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms