RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 BMP7P18075 431 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 RPS25P62851 125 aaKnown RBP16.08■□□□□ 0.16
DDX28-201ENST00000332395 BTG2P78543 158 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 TMPRSS11FQ6ZWK6 438 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 GRAMD2AQ8IUY3 354 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 CDK20Q8IZL9 346 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 OR6C4Q8NGE1 309 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 ADAMTS18Q8TE60 1221 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 CHAC2Q8WUX2 184 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 OTULINQ96BN8 352 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 ZNF486Q96H40 463 aaPredicted RBP16.08■□□□□ 0.16
DDX28-201ENST00000332395 DGAT2Q96PD7 388 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 ENKD1Q9H0I2 346 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 RERGLQ9H628 205 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 UBE2ZQ9H832 354 aaPredicted RBP16.08■□□□□ 0.16
DDX28-201ENST00000332395 EVA1AQ9H8M9 152 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 TMEM5Q9Y2B1 443 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 SF3B6Q9Y3B4 125 aaKnown RBP16.08■□□□□ 0.16
DDX28-201ENST00000332395 CLDN16Q9Y5I7 305 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 USP34Q70CQ2 3546 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 SPTBP11277 2137 aa16.08■□□□□ 0.16
DDX28-201ENST00000332395 OR2W5A6NFC9 320 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 CLDN4O14493 209 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 RGS13O14921 159 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 IGHA1P01876 353 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 GUSBP08236 651 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 GTF2E2P29084 291 aaKnown RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 MLLT3P42568 568 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 GABRA4P48169 554 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 SEPHS1P49903 392 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 GFERP55789 205 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 ZNF267Q14586 743 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 CLPPQ16740 277 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 GARNL3Q5VVW2 1013 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 C22orf42Q6IC83 251 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 SMARCD3Q6STE5 483 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 OR13C2Q8NGS9 318 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 CEP19Q96LK0 163 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 ZNF285Q96NJ3 590 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 MEPEQ9NQ76 525 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 DNAJB12Q9NXW2 375 aaKnown RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 FLRT3Q9NZU0 649 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 PLCL2Q9UPR0 1127 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 PCDHGB6Q9Y5F9 930 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 THADAQ6YHU6 1953 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 LRRTM2O43300 516 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 CHP2O43745 196 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 DYRK3O43781 588 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 ADAM11O75078 769 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 CDRT1O95170 752 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 RCBTB2O95199 551 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 SAGP10523 405 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 ATP6V1E1P36543 226 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 RACK1P63244 317 aaKnown RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 MXD1Q05195 221 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 FZD5Q13467 585 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 UBXN2BQ14CS0 331 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 CARTPTQ16568 116 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 COL13A1Q5TAT6 717 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 RPL13AP3Q6NVV1 102 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 PLBD1Q6P4A8 553 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 NPSR1Q6W5P4 371 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 BMP8AQ7Z5Y6 402 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 GID4Q8IVV7 300 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 LNX2Q8N448 690 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 METTL27Q8N6F8 245 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 POC5Q8NA72 575 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 PSD4Q8NDX1 1056 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 C1GALT1C1Q96EU7 318 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 MMABQ96EY8 250 aaPredicted RBP16.07■□□□□ 0.16
DDX28-201ENST00000332395 SPACA7Q96KW9 195 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 PTCHD1Q96NR3 888 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 TGM7Q96PF1 710 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 PHOX2BQ99453 314 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 SLC30A2Q9BRI3 323 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 ZNF649Q9BS31 505 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 SOHLH2Q9NX45 425 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 TOR4AQ9NXH8 423 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 SIGLEC7Q9Y286 467 aa16.07■□□□□ 0.16
DDX28-201ENST00000332395 A0A1B0GWA3 101 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 PRAMEF2O60811 474 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 RFPL3O75679 317 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 LALBAP00709 142 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 IL1AP01583 271 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 MAOAP21397 527 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 TNFSF8P32971 234 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 ACAA2P42765 397 aaKnown RBP16.06■□□□□ 0.16
DDX28-201ENST00000332395 GPR3P46089 330 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 CTBP2P56545 445 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 SLC35F1Q5T1Q4 408 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 THSD4Q6ZMP0 1018 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 SIRT6Q8N6T7 355 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 Q8N9G6 341 aaPredicted RBP16.06■□□□□ 0.16
DDX28-201ENST00000332395 RCBTB1Q8NDN9 531 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 CAPSLQ8WWF8 208 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 SLC25A46Q96AG3 418 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 SECISBP2Q96T21 854 aaKnown RBP16.06■□□□□ 0.16
DDX28-201ENST00000332395 TM9SF2Q99805 663 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 MIR1-1HGQ9H1L0 117 aa16.06■□□□□ 0.16
DDX28-201ENST00000332395 FN3KQ9H479 309 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms