RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TNFSF15O95150 251 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 IGHEP01854 428 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 HTR1AP08908 422 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 ITGAMP11215 1152 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 RPS4Y1P22090 263 aaKnown RBP11.78□□□□□ -0.52
DDX39A-202ENST00000324340 ELK4P28324 431 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 PIGAP37287 484 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 EBPQ15125 230 aaKnown RBP11.78□□□□□ -0.52
DDX39A-202ENST00000324340 IFI44LQ53G44 452 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 IGF2-ASQ6U949 168 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 CCDC81Q6ZN84 652 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 OLIG3Q7RTU3 272 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 C9orf40Q8IXQ3 194 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 APCDD1LQ8NCL9 501 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 IL17RDQ8NFM7 739 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 GPR32P1Q8NGA4 272 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 OR6F1Q8NGZ6 308 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 FAR1Q8WVX9 515 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 LPAR4Q99677 370 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 SLIRPQ9GZT3 109 aaKnown RBP11.78□□□□□ -0.52
DDX39A-202ENST00000324340 Q9N2J8 555 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 THSD1Q9NS62 852 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 FAM118AQ9NWS6 357 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 SEC14L3Q9UDX4 400 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 PTRH2Q9Y3E5 179 aaKnown RBP11.78□□□□□ -0.52
DDX39A-202ENST00000324340 WDR45Q9Y484 360 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 N6AMT1Q9Y5N5 214 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 CCDC88CQ9P219 2028 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 PTPRBP23467 1997 aa11.77□□□□□ -0.52
DDX39A-202ENST00000324340 IGHV3-20A0A0C4DH32 117 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 PRAMEF25A6NGN4 478 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 SYT5O00445 386 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 TERTO14746 1132 aaKnown RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 TO15178 435 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 SHOXO15266 292 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 TPST1O60507 370 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 MTRF1O75570 445 aaKnown RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 MT-ND1P03886 318 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 FABP3P05413 133 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 THBS1P07996 1170 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 MMP11P24347 488 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 CD82P27701 267 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 FOLR3P41439 243 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 RPS5P46782 204 aaKnown RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 PSPHP78330 225 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 VLDLRP98155 873 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 CYP27C1Q4G0S4 372 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 CCDC58Q4VC31 144 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 PAPD4Q6PIY7 484 aaKnown RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 TMPRSS7Q7RTY8 843 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 TSEN54Q7Z6J9 526 aaKnown RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZDHHC13Q8IUH4 622 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZDHHC21Q8IVQ6 265 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 NLGN4XQ8N0W4 816 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF619Q8N2I2 560 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF441Q8N8Z8 693 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 POC5Q8NA72 575 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 NLGN4YQ8NFZ3 816 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 OR4N2Q8NGD1 307 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 OR8K3Q8NH51 312 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 CT55Q8WUE5 264 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 IPCEF1Q8WWN9 437 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 GEMIN6Q8WXD5 167 aaKnown RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZG16BQ96DA0 208 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF354BQ96LW1 612 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 APOL4Q9BPW4 351 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 MESP1Q9BRJ9 268 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 PINK1Q9BXM7 581 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ADNPQ9H2P0 1102 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 DUSP21Q9H596 190 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 NTN4Q9HB63 628 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 FBXO34Q9NWN3 711 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 KCNN3Q9UGI6 736 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF223Q9UK11 482 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-202ENST00000324340 CBLCQ9ULV8 474 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 TRAPPC4Q9Y296 219 aa11.77□□□□□ -0.53
DDX39A-202ENST00000324340 SDK2Q58EX2 2172 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 C2orf92A0A1B0GVN3 265 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 FAM149AA5PLN7 773 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 CDRT15L2A8MXV6 281 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 C21orf140B9A014 251 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 SLC1A7O00341 560 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 CLIC3O95833 236 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 EPPINO95925 133 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 IGKV1D-16P01601 117 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 ALPPP05187 535 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 TCN2P20062 427 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 PRKAR1BP31321 381 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 IFNA8P32881 189 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 STAT5AP42229 794 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 NR4A2P43354 598 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 YAP1P46937 504 aaKnown RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 AP2S1P53680 142 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 TPD52P55327 224 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 SLC26A5P58743 744 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 PUM1Q14671 1186 aaKnown RBP eCLIP11.76□□□□□ -0.531e-11■■□□□ 11.6
DDX39A-202ENST00000324340 PCOLCEQ15113 449 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms