RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 LILRA2Q8N149 483 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 OR5M1Q8NGP8 315 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF563Q8TA94 476 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ADAMTS16Q8TE57 1224 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SGCZQ96LD1 299 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 MCHR1Q99705 422 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 NPAS1Q99742 590 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ARHGDIGQ99819 225 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 PKP2Q99959 881 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 ARHGAP9Q9BRR9 750 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 IL1RAPQ9NPH3 570 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 PRDM4Q9UKN5 801 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 SLC35A3Q9Y2D2 325 aa14.05□□□□□ -0.16
PDLIM5-202ENST00000318007 LINGO3P0C6S8 592 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 UMPSP11172 480 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 IDH2P48735 452 aaKnown RBP14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 GAS1P54826 345 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 FOXK1P85037 733 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 PMP22Q01453 160 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 SPIBQ01892 262 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 NRF1Q16656 503 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 LRRC36Q1X8D7 754 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 ARSKQ6UWY0 536 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 PLEKHM3Q6ZWE6 761 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 WDSUB1Q8N9V3 476 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 ICA1LQ8NDH6 482 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 DSN1Q9H410 356 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 SH2D2AQ9NP31 389 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 TIMMDC1Q9NPL8 285 aa14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 RPH3AQ9Y2J0 694 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-202ENST00000318007 FFAR1O14842 300 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 CCNA2P20248 432 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 RRM2P31350 389 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 CDH12P55289 794 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 TAS2R41P59536 307 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 KCNC4Q03721 635 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 ELOAQ14241 798 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 PACS2Q86VP3 889 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 P3H2Q8IVL5 708 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 SULF2Q8IWU5 870 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 GOLM1Q8NBJ4 401 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 B4GALNT2Q8NHY0 566 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF300Q96RE9 604 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 VNN3Q9NY84 501 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 TP53TG5Q9Y2B4 290 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 FAM32AQ9Y421 112 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 A0A1W2PQD3 144 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 MKRN2OSH3BPM6 223 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 SYT5O00445 386 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 CEACAM4O75871 244 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 NGFRP08138 427 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 RFPL3SP0C7P2 107 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 ACAA2P42765 397 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 TNFSF10P50591 281 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 RPP38P78345 283 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 C17orf67Q0P5P2 114 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 ZNF766Q5HY98 468 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 FGD3Q5JSP0 725 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 HMBOX1Q6NT76 420 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 RANBP3LQ86VV4 465 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 HS3ST5Q8IZT8 346 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 OR4K17Q8NGC6 315 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 OR1J4Q8NGS1 313 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 PMM1Q92871 262 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 MAGIXQ9H6Y5 334 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 TUBA8Q9NY65 449 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 CNIH4Q9P003 139 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 ICAM5Q9UMF0 924 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 PKD1L2Q7Z442 2459 aa14.03□□□□□ -0.16
PDLIM5-202ENST00000318007 FAM166BA8MTA8 275 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 SP1P08047 785 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 GUSBP08236 651 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 LCN1P31025 176 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.161e-7■■■■■ 32.8
PDLIM5-202ENST00000318007 OR1Q1Q15612 314 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 MEX3DQ86XN8 651 aaKnown RBP14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 DND1Q8IYX4 353 aaKnown RBP14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 MDS2Q8NDY4 140 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 HAS2Q92819 552 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 C5orf34Q96MH7 638 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 SMAD5Q99717 465 aaKnown RBP14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 ANGPTL4Q9BY76 406 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 TSPAN10Q9H1Z9 355 aaPredicted RBP14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 SLC7A7Q9UM01 511 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 MAGED1Q9Y5V3 778 aaPredicted RBP14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 ENPP4Q9Y6X5 453 aa14.02□□□□□ -0.16
PDLIM5-202ENST00000318007 SAC3D1A6NKF1 404 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 KPNA4O00629 521 aaPredicted RBP14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 ATP6V1G2O95670 118 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 OPN1LWP04000 364 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 ANPEPP15144 967 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 CD46P15529 392 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 FASP25445 335 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 MST1P26927 711 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 P2RX1P51575 399 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 COPZ1P61923 177 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 EPS8Q12929 822 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 IQCCQ4KMZ1 466 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 AP1ARQ63HQ0 302 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms