RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 PPM1BO75688 479 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 ACSM4P0C7M7 580 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 SELENOPP49908 381 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 CLDN2P57739 230 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 DGCR2P98153 550 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 DHCR24Q15392 516 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 SLC48A1Q6P1K1 146 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 CNKSR3Q6P9H4 555 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 ABHD17CQ6PCB6 329 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 RPTNQ6XPR3 784 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 TPRA1Q86W33 373 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 PTP4A1Q93096 173 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 HGDQ93099 445 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 GIMAP5Q96F15 307 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 CACNG6Q9BXT2 260 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 DPH1Q9BZG8 443 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 GSX2Q9BZM3 304 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 KLHL1Q9NR64 748 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 CALML5Q9NZT1 146 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 ZMIZ1Q9ULJ6 1067 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 MEIKINA0A087WXM9 373 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 PRRT4C9JH25 899 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 NUPL2O15504 423 aaKnown RBP12.49□□□□□ -0.41
SKA3-202ENST00000314759 HPXP02790 462 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 ANKRD34CP0C6C1 535 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 F3P13726 295 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 IL32P24001 234 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 CERS1P27544 350 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 MPIP34949 423 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 ARFIP1P53367 373 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 RAB14P61106 215 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 GSG1Q2KHT4 349 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
SKA3-202ENST00000314759 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
SKA3-202ENST00000314759 HACD4Q5VWC8 232 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 PXKQ7Z7A4 578 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 SMAP2Q8WU79 429 aaPredicted RBP12.49□□□□□ -0.41
SKA3-202ENST00000314759 ZFP3Q96NJ6 502 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 C1QTNF2Q9BXJ5 285 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
SKA3-202ENST00000314759 TMEM5Q9Y2B1 443 aa12.49□□□□□ -0.41
SKA3-202ENST00000314759 BHLHE40O14503 412 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 SC5DO75845 299 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SLC35G4P0C7Q5 338 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 PRKACAP17612 351 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 DRD5P21918 477 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 TEAD1P28347 426 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ACVR1BP36896 505 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 MLF2Q15773 248 aaPredicted RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 FRRS1Q6ZNA5 592 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SLC16A11Q8NCK7 471 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 TMIEQ8NEW7 156 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 OR2T35Q8NGX2 323 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 BRIX1Q8TDN6 353 aaKnown RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 GIMAP1Q8WWP7 306 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 FERD3LQ96RJ6 166 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 NDC1Q9BTX1 674 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 PTTG3PQ9NZH4 202 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ZNF443Q9Y2A4 671 aaPredicted RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 MRPS7Q9Y2R9 242 aaKnown RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 FKBP7Q9Y680 259 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 KCNMB2Q9Y691 235 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 A0A0B4J203 849 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 MT-ND5P03915 603 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ADH1AP07327 375 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 RHOP08100 348 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 MAKP20794 623 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 NTHL1P78549 312 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 FTMTQ8N4E7 242 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 TTLQ8NG68 377 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 OR4D9Q8NGE8 314 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ADAMTS14Q8WXS8 1223 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 OR8D1Q8WZ84 308 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 FBXW5Q969U6 566 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 PGLYRP3Q96LB9 341 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ZNF681Q96N22 645 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 LRRC3BQ96PB8 259 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 PRSS27Q9BQR3 290 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ACTRT3Q9BYD9 372 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SYNPO2LQ9H987 977 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 C20orf141Q9NUB4 165 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SIDT1Q9NXL6 827 aaKnown RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 MDC1Q14676 2089 aaKnown RBP12.48□□□□□ -0.41
SKA3-202ENST00000314759 CENPVL1A0A0U1RR11 272 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 ANTXRLA6NF34 631 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 UNC119BA6NIH7 251 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 TOR1AO14656 332 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SSNA1O43805 119 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 SERPINI2O75830 405 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 RGS11O94810 467 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 MT-ND4P03905 459 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 PCCBP05166 539 aa12.48□□□□□ -0.41
SKA3-202ENST00000314759 DDX6P26196 483 aaKnown RBP eCLIP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms