RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 PRSS1P07477 247 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ZNF728P0DKX0 622 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 GTF2A2P52657 109 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SCAND1P57086 179 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 RHBDL3P58872 404 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ARHGAP8P85298 464 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SRSF5Q13243 272 aaKnown RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 OR2F1Q13607 317 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SHHQ15465 462 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 KIAA1211LQ6NV74 962 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SLC38A9Q8NBW4 561 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 FAM156AQ8NDB6 213 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 OR4S1Q8NGB4 309 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 OR4C15Q8NGM1 316 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 NAA11Q9BSU3 229 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 CHRDL1Q9BU40 450 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 NMUR2Q9GZQ4 415 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 RNF150Q9ULK6 438 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 B3GALT5Q9Y2C3 310 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 CD109Q6YHK3 1445 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 A0A0A6YYK5 440 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 C19orf81C9J6K1 198 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 M0R296 226 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SYN3O14994 580 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 YIF1AO95070 293 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 GYPAP02724 150 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SLC25A4P12235 298 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 CDK8P49336 464 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ZNF528Q3MIS6 628 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 GPR33Q49SQ1 333 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 LIPKQ5VXJ0 399 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 LILRB4Q8NHJ6 448 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ZNF418Q8TF45 676 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ZFPM2Q8WW38 1151 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 UPRTQ96BW1 309 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 KREMEN1Q96MU8 473 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 UBL7Q96S82 380 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 C16orf70Q9BSU1 422 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 PKIBQ9C010 78 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 THAP2Q9H0W7 228 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 GPR160Q9UJ42 338 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SNX10Q9Y5X0 201 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 CPQQ9Y646 472 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 DUSP10Q9Y6W6 482 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 A0A087X0M5 115 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 A0A1B0GX30 115 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 C11orf98E9PRG8 122 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 TLX2O43763 284 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 NPHS1O60500 1241 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 HPRP00739 348 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ABOP16442 354 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 CDH17Q12864 832 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 MARC1Q5VT66 337 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 AADACL3Q5VUY0 350 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 KIAA0319Q5VV43 1072 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 STUMQ69YW2 141 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 CLEC10AQ8IUN9 316 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ACOT4Q8N9L9 421 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 ZBTB44Q8NCP5 570 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SLCO2A1Q92959 643 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 KCND2Q9NZV8 630 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 SALL4Q9UJQ4 1053 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 USP32Q8NFA0 1604 aa7.22□□□□□ -1.25
LIMCH1-201ENST00000313860 GLOD5A6NK44 160 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 ARPC1BO15143 372 aaKnown RBP7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 SYNGR2O43760 224 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 RAMP2O60895 175 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 AIFM1O95831 613 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 ACTL6AO96019 429 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 FAM87AP0C7U9 286 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 AGXTP21549 392 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 LPOP22079 712 aaPredicted RBP7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 HIST1H1TP22492 207 aaPredicted RBP7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 PCSK1P29120 753 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 GPR12P47775 334 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 GNB1P62873 340 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 MALLQ13021 153 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 CRHR2Q13324 411 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 DGAT2L7PQ6IED9 249 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 FAM131BQ86XD5 332 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 TMEM251Q8N6I4 163 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 NEIL3Q8TAT5 605 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 BMFQ96LC9 184 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 RNF2Q99496 336 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 KLK14Q9P0G3 267 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 IGSF9Q9P2J2 1179 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 NAGKQ9UJ70 344 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 UNC119BA6NIH7 251 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 IGSF6O95976 241 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 GZMAP12544 262 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 GABRR1P24046 479 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 DNAJB1P25685 340 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 CD200P41217 278 aa7.21□□□□□ -1.25
LIMCH1-201ENST00000313860 WASP42768 502 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms