RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 COQ10BQ9H8M1 238 aa13.09□□□□□ -0.31
PPP1CA-201ENST00000312989 HHATLQ9HCP6 504 aa13.09□□□□□ -0.31
PPP1CA-201ENST00000312989 PACSIN3Q9UKS6 424 aa13.09□□□□□ -0.31
PPP1CA-201ENST00000312989 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
PPP1CA-201ENST00000312989 USH1CQ9Y6N9 552 aa13.09□□□□□ -0.31
PPP1CA-201ENST00000312989 DUXAA6NLW8 204 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 EIF1AYO14602 144 aaKnown RBP13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 STX11O75558 287 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 OPN1LWP04000 364 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 IDO1P14902 403 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 HPGDP15428 266 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 CD1EP15812 388 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ELK4P28324 431 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ADH6P28332 368 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 PGM1P36871 562 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 PCYT1AP49585 367 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ZNF41P51814 821 aaPredicted RBP13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 EEFSECP57772 596 aaKnown RBP13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 MYBPHQ13203 477 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 DAZAP2Q15038 168 aaPredicted RBP13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 GPR68Q15743 365 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 GTDC1Q4AE62 458 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 COX20Q5RI15 118 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 RNF130Q86XS8 419 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ZNF527Q8NB42 609 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 GLB1L3Q8NCI6 653 aaPredicted RBP13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 CCDC168Q8NDH2 2452 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 FBXO27Q8NI29 283 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 LINC01560Q8TB33 94 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 FAM222BQ8WU58 562 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ROPN1LQ96C74 230 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 EBF4Q9BQW3 602 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 RBM24Q9BX46 236 aaKnown RBP13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 SLC38A1Q9H2H9 487 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 PIGMQ9H3S5 423 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 SLC52A3Q9NQ40 469 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 RASSF1Q9NS23 344 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ZIM2Q9NZV7 527 aa13.08□□□□□ -0.31
PPP1CA-201ENST00000312989 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.32
PPP1CA-201ENST00000312989 VPS13CQ709C8 3753 aa13.08□□□□□ -0.32
PPP1CA-201ENST00000312989 A0A1W2PPR1 153 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CCDC154A6NI56 674 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CLDN24A6NM45 220 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 TNFSF11O14788 317 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 MSTNO14793 375 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF264O43296 627 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CXCL13O43927 109 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 EIF4E2O60573 245 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 SLC22A3O75751 556 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 GSNP06396 782 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CHRM4P08173 479 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 UBL4AP11441 157 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 PEX19P40855 299 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 FGFBP1Q14512 234 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 GSTA3Q16772 222 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 OR2A2Q6IF42 318 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 ESPNLQ6ZVH7 1005 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 VPS37AQ8NEZ2 397 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 OR5W2Q8NH69 310 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 OR2V1Q8NHB1 315 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 ZFP90Q8TF47 636 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 OR52E6Q96RD3 313 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 PANX1Q96RD7 426 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 SRXN1Q9BYN0 137 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 LAT2Q9GZY6 243 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 QRSL1Q9H0R6 528 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 OPN3Q9H1Y3 402 aaPredicted RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 POLE3Q9NRF9 147 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 PCDHGB4Q9UN71 923 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 A6NNC1 897 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 H6PDO95479 791 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CD8BP10966 210 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 RPS4Y1P22090 263 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 EIF1P41567 113 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 EIF1AXP47813 144 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 KHKP50053 298 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 SIRPAP78324 504 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CHRNEQ04844 493 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 FAM27E3Q08E93 113 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 QPRTQ15274 297 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 SYPL1Q16563 259 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 FAM214BQ7L5A3 538 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 HMGN2P46Q86SG4 172 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 CDH24Q86UP0 819 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 FUNDC1Q8IVP5 155 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 LILRA2Q8N149 483 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 TOR1AIP2Q8NFQ8 470 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 XAGE5Q8WWM1 108 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 OIT3Q8WWZ8 545 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 VPS33AQ96AX1 596 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 KLHL15Q96M94 604 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 LIME1Q9H400 295 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 EXD2Q9NVH0 621 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms