RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 MT-ND1P03886 318 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 GKN3PP0CG01 181 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 CCL3P10147 92 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 CD46P15529 392 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 ELAVL4P26378 380 aaKnown RBP8.27□□□□□ -1.09
USP15-202ENST00000312635 RRM2P31350 389 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 DLX5P56178 289 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 SPIBQ01892 262 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 DGCR6Q14129 220 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 TRAM2Q15035 370 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 OR1Q1Q15612 314 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 OR1C1Q15619 314 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 BORAQ6PGQ7 559 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 LINC00696Q6ZRV3 163 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 AMIGO2Q86SJ2 522 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 HIPK1Q86Z02 1210 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 RBM45Q8IUH3 476 aaKnown RBP8.27□□□□□ -1.09
USP15-202ENST00000312635 TMCO5AQ8N6Q1 288 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 MDS2Q8NDY4 140 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 FDCSPQ8NFU4 85 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 TMEM234Q8WY98 164 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 SDCCAG3Q96C92 435 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 HS6ST2Q96MM7 605 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 WFDC6Q9BQY6 131 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 C9orf16Q9BUW7 83 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 PTGES2Q9H7Z7 377 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 SELENONQ9NZV5 590 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 NKX1-2Q9UD57 310 aaPredicted RBP8.27□□□□□ -1.09
USP15-202ENST00000312635 KLF13Q9Y2Y9 288 aaPredicted RBP8.27□□□□□ -1.09
USP15-202ENST00000312635 DMDP11532 3685 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 KNTC1P50748 2209 aa8.27□□□□□ -1.09
USP15-202ENST00000312635 A0A087WZY1 265 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 HTR3EA5X5Y0 456 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ARRDC5A6NEK1 342 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 FRS3O43559 492 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 TPST2O60704 377 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 BCAS1O75363 584 aaPredicted RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 TRIM3O75382 744 aaPredicted RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 NEURL1O76050 574 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ITGB2P05107 769 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 HTR3AP46098 478 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ARG2P78540 354 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 GANABQ14697 944 aaKnown RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 COL28A1Q2UY09 1125 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 FBXW10Q5XX13 1052 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 SLC25A25Q6KCM7 469 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ULK3Q6PHR2 472 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 SHQ1Q6PI26 577 aaKnown RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 IGFL3Q6UXB1 125 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ZNF227Q86WZ6 799 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PLCZ1Q86YW0 608 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 FADS6Q8N9I5 356 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 GPR119Q8TDV5 335 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ADAMTS16Q8TE57 1224 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ST8SIA1Q92185 356 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 SLC41A3Q96GZ6 507 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 MPP4Q96JB8 637 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 C5orf34Q96MH7 638 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 FAM173AQ9BQD7 235 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PSD2Q9BQI7 771 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 RTN4RQ9BZR6 473 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 NMNAT1Q9HAN9 279 aaPredicted RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 NTN4Q9HB63 628 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PROK2Q9HC23 129 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ACER3Q9NUN7 267 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 TMCC3Q9ULS5 477 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 RAXQ9Y2V3 346 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 SAMHD1Q9Y3Z3 626 aaKnown RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 TESMINQ9Y4I5 508 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 LYVE1Q9Y5Y7 322 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 FRYLO94915 3013 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 CEP250Q9BV73 2442 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 A0A0B4J2E0 115 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 A0A1B0GX12 115 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 MED19A0JLT2 244 aaPredicted RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 CPSF4LA6NMK7 179 aaKnown RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 C1QTNF9BB2RNN3 333 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 KLRC4-KLRK1H3BQV0 150 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 J3KTA2 159 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 FFAR1O14842 300 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 OIP5O43482 229 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 CHP2O43745 196 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PEX1O43933 1283 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 CDC40O60508 579 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP15-202ENST00000312635 E2F6O75461 281 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 SLC25A12O75746 678 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 SP1P08047 785 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 C1QTNF9P0C862 333 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PNMTP11086 282 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 GP1BBP13224 206 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PRG2P13727 222 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 ITPKBP27987 946 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 HTR2AP28223 471 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 LIMS1P48059 325 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 MASP1P48740 699 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 CDH12P55289 794 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 PIN1Q13526 163 aaPredicted RBP8.26□□□□□ -1.09
USP15-202ENST00000312635 NDUFAF6Q330K2 333 aa8.26□□□□□ -1.09
USP15-202ENST00000312635 GLYR1Q49A26 553 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms