RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 GRHL3Q8TE85 626 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 ACOT11Q8WXI4 607 aaPredicted RBP20.66■□□□□ 0.9
IRF3-201ENST00000309877 RASL10BQ96S79 203 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 SELENONQ9NZV5 590 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 ENOPH1Q9UHY7 261 aa20.66■□□□□ 0.9
IRF3-201ENST00000309877 ZNF292O60281 2723 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 LINGO3P0C6S8 592 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 CCR4P51679 360 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 TPD52P55327 224 aaPredicted RBP20.65■□□□□ 0.9
IRF3-201ENST00000309877 NPRL3Q12980 569 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 SKP2Q13309 424 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 MRGPREQ86SM8 312 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 LSMEM1Q8N8F7 131 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 UCK2Q9BZX2 261 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 LAT2Q9GZY6 243 aa20.65■□□□□ 0.9
IRF3-201ENST00000309877 MRPS18BQ9Y676 258 aaKnown RBP20.65■□□□□ 0.9
IRF3-201ENST00000309877 A0A1B0GWA3 101 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 SLC16A6O15403 523 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 SCO2O43819 266 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 ITGA10O75578 1167 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 ANGPTL1O95841 491 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 IL10RAQ13651 578 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 USP51Q70EK9 711 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 PIGXQ8TBF5 258 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 TMEM255BQ8WV15 326 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 TTC9Q92623 222 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 HGDQ93099 445 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 KIAA1143Q96AT1 154 aaPredicted RBP20.64■□□□□ 0.9
IRF3-201ENST00000309877 SH3YL1Q96HL8 342 aaPredicted RBP20.64■□□□□ 0.9
IRF3-201ENST00000309877 DGCR6LQ9BY27 220 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 GABARAPL3Q9BY60 117 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 GPN2Q9H9Y4 310 aaPredicted RBP20.64■□□□□ 0.9
IRF3-201ENST00000309877 ASCL3Q9NQ33 180 aa20.64■□□□□ 0.9
IRF3-201ENST00000309877 RIF1Q5UIP0 2472 aaKnown RBP20.64■□□□□ 0.89
IRF3-201ENST00000309877 A0A0B4J2E0 115 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 A0A1B0GX12 115 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 BCKDKO14874 412 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 OIP5O43482 229 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 HCRTR2O43614 444 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 FBXO45P0C2W1 286 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 IGF2-ASQ6U949 168 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 MBOAT2Q6ZWT7 520 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 ZER1Q7Z7L7 766 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 MUS81Q96NY9 551 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 NODALQ96S42 347 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 RTN4RQ9BZR6 473 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 GRIP2Q9C0E4 1043 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 CDCP1Q9H5V8 836 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 KRCC1Q9NPI7 259 aaPredicted RBP20.64■□□□□ 0.89
IRF3-201ENST00000309877 IL17BQ9UHF5 180 aa20.64■□□□□ 0.89
IRF3-201ENST00000309877 YARS2Q9Y2Z4 477 aaKnown RBP20.64■□□□□ 0.89
IRF3-201ENST00000309877 MASP2O00187 686 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 CHP2O43745 196 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 EIF4E2O60573 245 aaKnown RBP20.63■□□□□ 0.89
IRF3-201ENST00000309877 LYPD3O95274 346 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 NTN1O95631 604 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 SLC6A8P48029 635 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 CHN2P52757 468 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 ZNF117Q03924 483 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 ALG10BQ5I7T1 473 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 C1orf94Q6P1W5 598 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 ULK3Q6PHR2 472 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 KLHL17Q6TDP4 642 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 CBLN3Q6UW01 205 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 UGT2A3Q6UWM9 527 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 LYPD8Q6UX82 237 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 RPS19BP1Q86WX3 136 aaKnown RBP20.63■□□□□ 0.89
IRF3-201ENST00000309877 DTX1Q86Y01 620 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 C8orf59Q8N0T1 100 aaPredicted RBP20.63■□□□□ 0.89
IRF3-201ENST00000309877 PARP8Q8N3A8 854 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 GNPDA2Q8TDQ7 276 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 PRSS27Q9BQR3 290 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 WDR70Q9NW82 654 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 PCDHGB5Q9Y5G0 923 aa20.63■□□□□ 0.89
IRF3-201ENST00000309877 LSM11P83369 360 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■■■□ 19.8
IRF3-201ENST00000309877 FCRLBQ6BAA4 426 aa20.62■□□□□ 0.89
IRF3-201ENST00000309877 OPN5Q6U736 354 aa20.62■□□□□ 0.89
IRF3-201ENST00000309877 PRICKLE2Q7Z3G6 844 aa20.62■□□□□ 0.89
IRF3-201ENST00000309877 MISPQ8IVT2 679 aa20.62■□□□□ 0.89
IRF3-201ENST00000309877 SPACA9Q96E40 222 aaPredicted RBP20.62■□□□□ 0.89
IRF3-201ENST00000309877 GMPPBQ9Y5P6 360 aa20.62■□□□□ 0.89
IRF3-201ENST00000309877 WDFY3Q8IZQ1 3526 aa20.62■□□□□ 0.89
IRF3-201ENST00000309877 MAGEA13PA6NCF6 341 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 SERPINA7P05543 415 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 ITPKBP27987 946 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 SOX3P41225 446 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 IDH2P48735 452 aaKnown RBP20.61■□□□□ 0.89
IRF3-201ENST00000309877 COX10Q12887 443 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 IL18R1Q13478 541 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 ATP1A4Q13733 1029 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 KEAP1Q14145 624 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 NTRK2Q16620 822 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 NRMQ8IXM6 262 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 RNF113BQ8IZP6 322 aaKnown RBP20.61■□□□□ 0.89
IRF3-201ENST00000309877 DNAJA4Q8WW22 397 aaPredicted RBP20.61■□□□□ 0.89
IRF3-201ENST00000309877 TMEM239Q8WW34 195 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 GATA6Q92908 595 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 MPP4Q96JB8 637 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 HS6ST2Q96MM7 605 aa20.61■□□□□ 0.89
IRF3-201ENST00000309877 IP6K3Q96PC2 410 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms