RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 OR14L1PQ8NHC6 308 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 NEIL3Q8TAT5 605 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 ST8SIA1Q92185 356 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 SARAFQ96BY9 339 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 SH3YL1Q96HL8 342 aaPredicted RBP16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 EXO5Q9H790 373 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 RALYQ9UKM9 306 aaKnown RBP16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 BAG5Q9UL15 447 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 CENPVL1A0A0U1RR11 272 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 CFAP73A6NFT4 308 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 BCKDKO14874 412 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 MFN2O95140 757 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 CHMP24386 653 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 AQP1P29972 269 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 CCR4P51679 360 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 CBX1P83916 185 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 BNIP1Q12981 228 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 COLEC12Q5KU26 742 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 ENPP6Q6UWR7 440 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 GFRALQ6UXV0 394 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 ZNF836Q6ZNA1 936 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 OLIG3Q7RTU3 272 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 EID3Q8N140 333 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 LZICQ8WZA0 190 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 POP5Q969H6 163 aaKnown RBP16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 MRGPRX4Q96LA9 322 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 CDRT15Q96T59 188 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 DEFB127Q9H1M4 99 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 MUC13Q9H3R2 512 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 PIF1Q9H611 641 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 DNAJB12Q9NXW2 375 aaKnown RBP16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 MAGEL2Q9UJ55 1249 aa16.26■□□□□ 0.19
SSSCA1-201ENST00000309328 SPENQ96T58 3664 aaKnown RBP16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 M0QX08 132 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 ETV2O00321 342 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 CDC40O60508 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 CYP7B1O75881 506 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 LINGO3P0C6S8 592 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 HK1P19367 917 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 FKBP2P26885 142 aaKnown RBP16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 ELK4P28324 431 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 HTR3AP46098 478 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 CASP6P55212 293 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 COPZ1P61923 177 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 BNIP2Q12982 314 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 SF3B4Q15427 424 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 FXNQ16595 210 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 RAET1LQ5VY80 246 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 C6orf89Q6UWU4 347 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 VRK2Q86Y07 508 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 GTPBP8Q8N3Z3 284 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 GPR119Q8TDV5 335 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 MED17Q9NVC6 651 aa16.25■□□□□ 0.19
SSSCA1-201ENST00000309328 EBAG9O00559 213 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 CXCR6O00574 342 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 GYG2O15488 501 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 ZIC3O60481 467 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 KDELR2P33947 212 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 MAP2K6P52564 334 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 DLX5P56178 289 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 FOXK1P85037 733 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 BCL2A1Q16548 175 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 PLPPR5Q32ZL2 321 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 SLC25A53Q5H9E4 307 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 CBLN3Q6UW01 205 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 PM20D2Q8IYS1 436 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 PROX1Q92786 737 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 SFXN2Q96NB2 322 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 TSPAN10Q9H1Z9 355 aaPredicted RBP16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 ADPRHL2Q9NX46 363 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 TAS2R1Q9NYW7 299 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 CD300AQ9UGN4 299 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 SLC9A8Q9Y2E8 581 aa16.24■□□□□ 0.19
SSSCA1-201ENST00000309328 HOXD4P09016 255 aaPredicted RBP16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 GGT1P19440 569 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 ME2P23368 584 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 PTGS2P35354 604 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 PTGER4P35408 488 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 KCNJ5P48544 419 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 GFRA1P56159 465 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 NCALDP61601 193 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 EPS8Q12929 822 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 TMEM44Q2T9K0 475 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 ARSKQ6UWY0 536 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 YRDCQ86U90 279 aaKnown RBP16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 FBXO27Q8NI29 283 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 ZNF563Q8TA94 476 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 CNOT9Q92600 299 aaKnown RBP16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 ABTB1Q969K4 478 aaPredicted RBP16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 BTBD10Q9BSF8 475 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 TESQ9UGI8 421 aaKnown RBP16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 RPS6KA6Q9UK32 745 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 SPIN1Q9Y657 262 aaPredicted RBP16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 AP4B1Q9Y6B7 739 aa16.23■□□□□ 0.19
SSSCA1-201ENST00000309328 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 CLDN24A6NM45 220 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 GJE1A6NN92 205 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 PRRG2O14669 202 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 FMO6PO60774 539 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 STAMBPO95630 424 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms