RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 GOLGA8NF8WBI6 632 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 SIAH2O43255 324 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 BCAS1O75363 584 aaPredicted RBP17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 GUSBP08236 651 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 CD8BP10966 210 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 PRKCAP17252 672 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 UQCRC2P22695 453 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 EIF1AXP47813 144 aaKnown RBP17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 CLNS1AP54105 237 aaKnown RBP17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 SUMO3P55854 103 aaPredicted RBP17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 RPS3AP61247 264 aaKnown RBP17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 MAPK14Q16539 360 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 SLC25A53Q5H9E4 307 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 PDZK1Q5T2W1 519 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 ANXA8L1Q5VT79 327 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 C22orf34Q6ZV56 151 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 CHMP1BQ7LBR1 199 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 CNEP1R1Q8N9A8 125 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 FAM71CQ8NEG0 241 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 ARL8AQ96BM9 186 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 NEURL3Q96EH8 262 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 DACH2Q96NX9 599 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 SAP130Q9H0E3 1048 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 BTNL2Q9UIR0 455 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 DUXAA6NLW8 204 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 TNFSF11O14788 317 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 CXCL13O43927 109 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 KIAA0513O60268 411 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 CPSF4O95639 269 aaKnown RBP17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 AK1P00568 194 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 HRGP04196 525 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 OR12D1P0DN82 309 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ELK4P28324 431 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ADH6P28332 368 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 CDKN2CP42773 168 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF41P51814 821 aaPredicted RBP17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 IST1P53990 364 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 NME5P56597 212 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 SIRPAP78324 504 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 SKP2Q13309 424 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 SLC9B1Q4ZJI4 515 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 TYW3Q6IPR3 259 aaKnown RBP17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ESPNLQ6ZVH7 1005 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 FAM214BQ7L5A3 538 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF527Q8NB42 609 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 OR2V1Q8NHB1 315 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 FBXO27Q8NI29 283 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 RAB8BQ92930 207 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ZG16BQ96DA0 208 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 INPP5KQ9BT40 448 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 MANSC1Q9H8J5 431 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 COQ10BQ9H8M1 238 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 PLEKHF2Q9H8W4 249 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ARGLU1Q9NWB6 273 aaPredicted RBP17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 MKLN1Q9UL63 735 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 TESMINQ9Y4I5 508 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 ZFHX3Q15911 3703 aa17.75■□□□□ 0.43
PDZRN3-202ENST00000308537 SERINC4A6NH21 518 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 KLF11O14901 512 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 SS18L1O75177 396 aaPredicted RBP17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 EIF1P41567 113 aaKnown RBP17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 CPA2P48052 419 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 TNFAIP8L2Q6P589 184 aaPredicted RBP17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 FRRS1Q6ZNA5 592 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 SPATA19Q7Z5L4 167 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 KLHL15Q96M94 604 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 SRXN1Q9BYN0 137 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 CXXC4Q9H2H0 198 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 SLC6A13Q9NSD5 602 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 ST6GALNAC2Q9UJ37 374 aa17.74■□□□□ 0.43
PDZRN3-202ENST00000308537 SH3D21A4FU49 640 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 HMGN4O00479 90 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF264O43296 627 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 EIF4E2O60573 245 aaKnown RBP17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 STX11O75558 287 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 SMNDC1O75940 238 aaKnown RBP eCLIP17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 PGRP06401 933 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 KITP10721 976 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 FCGR2AP12318 317 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 S100A3P33764 101 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 CPOXP36551 454 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 CD79BP40259 229 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 GPR68Q15743 365 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 MAPK11Q15759 364 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 SGCBQ16585 318 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 LILRA2Q8N149 483 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 ZNF610Q8N9Z0 462 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 OR5W2Q8NH69 310 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 NINJ1Q92982 152 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 MARK4Q96L34 752 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 OR52B2Q96RD2 323 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 CLEC4AQ9UMR7 237 aa17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 GPC6Q9Y625 555 aaPredicted RBP17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 SETD2Q9BYW2 2564 aaPredicted RBP17.73■□□□□ 0.43
PDZRN3-202ENST00000308537 RAI1Q7Z5J4 1906 aaPredicted RBP17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 TRPC5OSA6NMA1 111 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 ADAM11O75078 769 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 GOSR1O95249 250 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 UBL4AP11441 157 aa17.72■□□□□ 0.43
PDZRN3-202ENST00000308537 PGM1P36871 562 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms