RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 OR2M5A3KFT3 312 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 B4DXG7 233 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AIM2O14862 343 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZIC3O60481 467 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SHOX2O60902 331 aaPredicted RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 THBS1P07996 1170 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HOXD4P09016 255 aaPredicted RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PEPDP12955 493 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RPS4Y1P22090 263 aaKnown RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ACVR2AP27037 513 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRDX6P30041 224 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PGM1P36871 562 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EIF1P41567 113 aaKnown RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC6A8P48029 635 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NUDT2P50583 147 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SMSP52788 366 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GFRA1P56159 465 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SRYQ05066 204 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RBBP4Q09028 425 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FOXF1Q12946 379 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SKP2Q13309 424 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SELPLGQ14242 412 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MAPK14Q16539 360 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZSWIM7Q19AV6 140 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PLPPR5Q32ZL2 321 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF311Q5JNZ3 666 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DCST1Q5T197 706 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MRPL2Q5T653 305 aaKnown RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CBLN3Q6UW01 205 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RPTNQ6XPR3 784 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 B3GNT6Q6ZMB0 384 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PIGWQ7Z7B1 504 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SERPINA11Q86U17 422 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HIPK4Q8NE63 616 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OR5M1Q8NGP8 315 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OR10A6Q8NH74 314 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PHF10Q8WUB8 498 aaKnown RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TMEM234Q8WY98 164 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CCDC120Q96HB5 630 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RNF145Q96MT1 663 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF607Q96SK3 696 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ECSITQ9BQ95 431 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC39A3Q9BRY0 314 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TRIM8Q9BZR9 551 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRDM14Q9GZV8 571 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MYLK2Q9H1R3 596 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 IKZF5Q9H5V7 419 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EFCAB1Q9HAE3 211 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EXOSC3Q9NQT5 275 aaKnown RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AP3M1Q9Y2T2 418 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GPC6Q9Y625 555 aaPredicted RBP9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DSPPQ9NZW4 1301 aa9.96□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MPDZO75970 2070 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 C7orf72A4D263 438 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AHRRA9YTQ3 701 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SEC14L5O43304 696 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OIP5O43482 229 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PGM3O95394 542 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PABPC4LP0CB38 370 aaKnown RBP9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ETS2P15036 469 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ELK4P28324 431 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 LHX2P50458 406 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EEFSECP57772 596 aaKnown RBP9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RPS3AP61247 264 aaKnown RBP9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 QPRTQ15274 297 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 INTS11Q5TA45 600 aaKnown RBP9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RNF220Q5VTB9 566 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AP1ARQ63HQ0 302 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NANOGP8Q6NSW7 305 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF836Q6ZNA1 936 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 VRK2Q86Y07 508 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ULK2Q8IYT8 1036 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 UBQLNLQ8IYU4 475 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GTPBP8Q8N3Z3 284 aaPredicted RBP9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CCDC197Q8NCU1 140 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FAM71CQ8NEG0 241 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ST8SIA1Q92185 356 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZG16BQ96DA0 208 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ARSGQ96EG1 525 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 WDYHV1Q96HA8 205 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TRIB1Q96RU8 372 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 KAT8Q9H7Z6 458 aaKnown RBP9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NANOGQ9H9S0 305 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 BCL2L10Q9HD36 194 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC13A4Q9UKG4 626 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ICAM5Q9UMF0 924 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AP4B1Q9Y6B7 739 aa9.95□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRORSD1PA6NEY8 169 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLDN24A6NM45 220 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GJE1A6NN92 205 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FXYD1O00168 92 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NDUFAB1O14561 156 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZG16O60844 167 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms