RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 RBCK1Q9BYM8 510 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ISG20L2Q9H9L3 353 aaKnown RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 NDOR1Q9UHB4 597 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ADAM29Q9UKF5 820 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ZFR2Q9UPR6 939 aaKnown RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 OR5K4A6NMS3 321 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 DNAJB6O75190 326 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 TRAPPC2P0DI81 140 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 TRAPPC2BP0DI82 140 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 ERGP11308 486 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.4
CTDP1-202ENST00000299543 SLC48A1Q6P1K1 146 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 OR6M1Q8NGM8 313 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 SETD6Q8TBK2 473 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.4
CTDP1-202ENST00000299543 RAB7BQ96AH8 199 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 PPA2Q9H2U2 334 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 IFT46Q9NQC8 304 aa12.52□□□□□ -0.4
CTDP1-202ENST00000299543 LOC105369274A0A096LPK9 316 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 CENPVL1A0A0U1RR11 272 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 A0A1W2PPK0 400 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 LINC01553A4QN01 128 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 LRRC72A6NJI9 287 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 TBX19O60806 448 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 PRKAR1AP10644 381 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 F3P13726 295 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 CMPK1P30085 196 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 AGERQ15109 404 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 MINDY4Q4G0A6 757 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 TMEM35AQ53FP2 167 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 MZT2BQ6NZ67 158 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 ZC3H14Q6PJT7 736 aaKnown RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 ARL9Q6T311 187 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 OR4N4Q8N0Y3 316 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 KLHL36Q8N4N3 616 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 OR7G2Q8NG99 324 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 SGTBQ96EQ0 304 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 KXD1Q9BQD3 176 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 HDAC8Q9BY41 377 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 HEXA-AS1Q9H8Q6 139 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 B3GAT2Q9NPZ5 323 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 COPS3Q9UNS2 423 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 EXOSC1Q9Y3B2 195 aaKnown RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 CDC42EP2O14613 210 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 GNB5O14775 395 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 PRG2P13727 222 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 GDI2P50395 445 aaKnown RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 RRAS2P62070 204 aaPredicted RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 GLYR1Q49A26 553 aaPredicted RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 TMEM31Q5JXX7 168 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 FIGNL1Q6PIW4 674 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 GDF7Q7Z4P5 450 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 LINC00471Q8N535 108 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 CLDN22Q8N7P3 220 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 CYB561A3Q8NBI2 242 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 RFKQ969G6 155 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 BCL2L10Q9HD36 194 aa12.52□□□□□ -0.41
CTDP1-202ENST00000299543 HINT3Q9NQE9 182 aaKnown RBP12.52□□□□□ -0.41
CTDP1-202ENST00000299543 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 SHISA3A0PJX4 238 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 GABRPO00591 440 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 CASC3O15234 703 aaKnown RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 ORC5O43913 435 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 LDB3O75112 727 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 NDUFS6O75380 124 aaKnown RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 SAGP10523 405 aaPredicted RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 SLC3A1Q07837 685 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 ASAH1Q13510 395 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 RIN1Q13671 783 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 RUNX3Q13761 415 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 TMPRSS9Q7Z410 1059 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 OR51A7Q8NH64 312 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 CCL4L1Q8NHW4 92 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 HYLS1Q96M11 299 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 GTPBP2Q9BX10 602 aaKnown RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 NIPAL2Q9H841 368 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 KCMF1Q9P0J7 381 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF624Q9P2J8 865 aaPredicted RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 RFPL3O75679 317 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 HLA-DPB1P04440 258 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 CEACAM5P06731 702 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 CXCL3P19876 107 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 GABRA5P31644 462 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 DEFA5Q01523 94 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF273Q14593 569 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 RPE65Q16518 533 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 ENPP7Q6UWV6 458 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 KANSL1Q7Z3B3 1105 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 GDPD1Q8N9F7 314 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 GRHL3Q8TE85 626 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms