RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ZNF420Q8TAQ5 688 aaPredicted RBP23.58■■□□□ 1.37
SDCCAG3-201ENST00000298537 LRR1Q96L50 414 aa23.58■■□□□ 1.37
SDCCAG3-201ENST00000298537 SAMD8Q96LT4 415 aa23.58■■□□□ 1.37
SDCCAG3-201ENST00000298537 ZNF559Q9BR84 538 aa23.58■■□□□ 1.37
SDCCAG3-201ENST00000298537 TBC1D23Q9NUY8 699 aa23.58■■□□□ 1.37
SDCCAG3-201ENST00000298537 EFCAB7A8K855 629 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 POLR1CO15160 346 aaPredicted RBP23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 GMFGO60234 142 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 MPZL2O60487 215 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 FOXD2O60548 495 aaPredicted RBP23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 GUSBP08236 651 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 CCL4P13236 92 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 HSDL2Q6YN16 418 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 MYDGFQ969H8 173 aa23.58■■□□□ 1.36
SDCCAG3-201ENST00000298537 IDSB3KWA1 339 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 DYRK3O43781 588 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 APOL3O95236 402 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 SMSP52788 366 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 LSM3P62310 102 aaKnown RBP23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 SYT14P1Q58G82 188 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 PPP1R3BQ86XI6 285 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 ERI1Q8IV48 349 aaKnown RBP23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 OR1N1Q8NGS0 311 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 POLDIP3Q9BY77 421 aaKnown RBP23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 IL20Q9NYY1 176 aa23.57■■□□□ 1.36
SDCCAG3-201ENST00000298537 M0R082 166 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 NTN3O00634 580 aaPredicted RBP23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 IL33O95760 270 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF91Q05481 1191 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 ALG10BQ5I7T1 473 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 TMEM201Q5SNT2 666 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF613Q6PF04 617 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 SVOPQ8N4V2 548 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 PLPP5Q8NEB5 264 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 DAZLQ92904 295 aaKnown RBP23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 KIF26BQ2KJY2 2108 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 IGLV3-12A0A075B6K2 115 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 SH3D21A4FU49 640 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 FRG2CA6NGY1 282 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF701M0R085 212 aaPredicted RBP23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 AHCYL1O43865 530 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 ICOSLGO75144 302 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 UTS2O95399 124 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 SYPP08247 313 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 LIPAP38571 399 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 STAT5AP42229 794 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 FAM199XQ6PEV8 388 aaPredicted RBP23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 OR13C2Q8NGS9 318 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 OR14A16Q8NHC5 309 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 YIPF6Q96EC8 236 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 TGIF2Q9GZN2 237 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 WWTR1Q9GZV5 400 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 R4GN57 208 aa23.56■■□□□ 1.36
SDCCAG3-201ENST00000298537 ADORA3P0DMS8 318 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF182P17025 639 aaPredicted RBP23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 TGFBR1P36897 503 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 GPR143P51810 404 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 TMBIM6P55061 237 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 SPCS2Q15005 226 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 FNDC7Q5VTL7 733 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF582Q96NG8 517 aaPredicted RBP23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 OR5M11Q96RB7 305 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 CLEC2DQ9UHP7 191 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 CARD8Q9Y2G2 431 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 FREM2Q5SZK8 3169 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 TRAV27A0A087WT01 109 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 CHP2O43745 196 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 REM1O75628 298 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 DCDP81605 110 aaKnown RBP23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 UBE2UQ5VVX9 321 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 THSD4Q6ZMP0 1018 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 TRUB1Q8WWH5 349 aaKnown RBP23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 RPL3LQ92901 407 aaKnown RBP23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 BPIFA2Q96DR5 249 aa23.55■■□□□ 1.36
SDCCAG3-201ENST00000298537 LRRN3E7EW58 273 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 DBTP11182 482 aaKnown RBP23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 PRKCDQ05655 676 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 IRF3Q14653 427 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 CTF1Q16619 201 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 ANKRD37Q7Z713 158 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 FAM26EQ8N5C1 309 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 TOR1AIP2Q8NFQ8 470 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 PHOSPHO1Q8TCT1 267 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 THAP3Q8WTV1 239 aaPredicted RBP23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 C8orf44Q96CB5 159 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 POLR2J2Q9GZM3 115 aaKnown RBP23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 OR52D1Q9H346 318 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 ENPP5Q9UJA9 477 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 TEX51A0A1B0GUA7 166 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 UNC119BA6NIH7 251 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 HEXBP07686 556 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 TBXA2RP21731 343 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 AVPR2P30518 371 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 TGFBR2P37173 567 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 TBCEQ15813 527 aaPredicted RBP23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 PAQR6Q6TCH4 344 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 MRGPREQ86SM8 312 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 LSMEM1Q8N8F7 131 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 HHATLQ9HCP6 504 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 UBQLN4Q9NRR5 601 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms